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The map label for this gene is yloA [H]

Identifier: 55980577

GI number: 55980577

Start: 575671

End: 577221

Strand: Reverse

Name: yloA [H]

Synonym: TTHA0608

Alternate gene names: 55980577

Gene position: 577221-575671 (Counterclockwise)

Preceding gene: 55980578

Following gene: 55980575

Centisome position: 31.21

GC content: 69.89

Gene sequence:

>1551_bases
ATGGAAGGCCTCCTGATCCACGCCGTCTTGCGGGAGCTTGAGAAGGAGCTCCCCGCCCAGAACCTCGGCCTCGCCTTCCC
CGAGGAGGGGACGGCGGCCATCCTCCTCAAGGGCCGGACGGGGCGGCTCTTCAACCTCGTCCTCCACTACCGCCCGCCCA
CCCCGAGCCTCGCCCTGGAGCCGGGGAGGCTCCAGGGGGAGCCCAAGACCCCCTTCCAGCGCCAGCTCCAGGCCCGGGTC
AAGGGGCCCCTGGTGGAGGCAAGCCAGCTCAAGCTGGACCGGGTGGCCTTCTTCCGCTTCGCCGGGGAGAAGGGCTTCGT
GGACGCCCCCCCTTCGGTCCTCGTCCTCGAGGCCACGGGGCGGAACGCCAACCTCCTCCTCCTGGACGAGGAGGGCCGGA
TCCTCGGGGTGGACCGGGTCATCACCAAGGAGGTGAACCGCTACCGGGAGCTGAGGCCCGGCCTCCCCTACACCCCCCCG
CCCCCCTACCGGAAGCTGGACCCGAGGACGCTTGCCGAGGAAGACCTCCTCCCCCTCCTGGGCAAGCCCCTCAAGGAGGT
GATCCGGCACGTGGACGGGGTGGGGCAGGAGCTCCTAAGGGAGCTCGCCCGGAGGGCGGGCCTCACCCCCGAGACCCCCC
TGGACGAGGCGGGGCTTGGGCGGGTGTACCGGGCCCTCAAGACCCTGGTGGAGGACCCCTCCTTGCGCACCGAGCTTTCC
GAGGAGCTGAGGCGGCGCTGGGCCGAGGAGGAGAAGGAGGCCTTAAGGAAGCCCCTCCTCGAGGCCCTGGACCGGGAGAT
CCGGACGCTCAAGGCGAGGCTTGGCGACTACCAGGAGGCCCTAGAGCGCCTGGAGGAGGCCGAGGCCCTGAGGAGGCGGG
CCGACCTCCTCCTCGCCCGGCTCAAGGAGGTGCCCAAGGGGGCGGAAAAGGTGGTCCTCGAGGGCTTTGACGGGAAGCCC
GTGGAAATCCCCTTAGACCCCGCCCTCTCCCCCCAGGAGAACGCCCGGAAGCTCTACGACCGGGCGAGGCGCCTGGAGGA
GCTCGCGGAAAAGGCCCTGGACCTCATCCCCAAGACCGAGGCCCGGATCCGAGAGCTGGAGGCGGAGAAGGAAAGGCTTA
GGACCCTGGACCTGGAGGGCCTCCTCGCCCTCGCGCAAAGGCCCAAGGGGGAGAAGGGCCTTAAGGTCGGCCTCCGCTAC
ACCTCCCCTTCCGGGTTTTTGGTCCTGGTGGGCCGGAACGCCAAGGAGAACGACCTCCTCACCCGGGCCGCCCACTCCGA
GGACCTCTGGTTCCACGCCCAAGGGGTGCCGGGAAGCCACGTGATCCTGAAAACCGAGGGGAAGAACCCGCCCCTGGAGG
ACCTCCTCTTCGCCGCGAGGCTCGCCGCCTACCACTCCAAGGCCCGGGGAGAGAGGCAGGTCCCGGTGGACTACACCCGG
AAAAAGCACGTGTGGCGGCCCAGGAAGGCCGCCCCGGGCCAGGTGCTCTACACCCAGGCCAAGACCCTCTTCGTGGAGGG
GCTTCTCCCCGAGCCCAGGGAGGAAGCCTAG

Upstream 100 bases:

>100_bases
TCTTGGAGGTGGGCTGGCGGGAGTGGGAGGTCAGGCTTCCCGTGGCCCACCCCCGGTTCCAGCAGGTGGGGCACACCGCC
TTTCTCGTGGCCCTTAGGCG

Downstream 100 bases:

>100_bases
CCCGCCGCTAGGCTTCCTCCCTGGGCCTCAAGACCCGCCGCCAAAGCCGACCTAGGCACACGGGCGGGCGCCAACCCCTA
GGGCCTCCAGGCGCCCCGCA

Product: RNA-biniding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MEGLLIHAVLRELEKELPAQNLGLAFPEEGTAAILLKGRTGRLFNLVLHYRPPTPSLALEPGRLQGEPKTPFQRQLQARV
KGPLVEASQLKLDRVAFFRFAGEKGFVDAPPSVLVLEATGRNANLLLLDEEGRILGVDRVITKEVNRYRELRPGLPYTPP
PPYRKLDPRTLAEEDLLPLLGKPLKEVIRHVDGVGQELLRELARRAGLTPETPLDEAGLGRVYRALKTLVEDPSLRTELS
EELRRRWAEEEKEALRKPLLEALDREIRTLKARLGDYQEALERLEEAEALRRRADLLLARLKEVPKGAEKVVLEGFDGKP
VEIPLDPALSPQENARKLYDRARRLEELAEKALDLIPKTEARIRELEAEKERLRTLDLEGLLALAQRPKGEKGLKVGLRY
TSPSGFLVLVGRNAKENDLLTRAAHSEDLWFHAQGVPGSHVILKTEGKNPPLEDLLFAARLAAYHSKARGERQVPVDYTR
KKHVWRPRKAAPGQVLYTQAKTLFVEGLLPEPREEA

Sequences:

>Translated_516_residues
MEGLLIHAVLRELEKELPAQNLGLAFPEEGTAAILLKGRTGRLFNLVLHYRPPTPSLALEPGRLQGEPKTPFQRQLQARV
KGPLVEASQLKLDRVAFFRFAGEKGFVDAPPSVLVLEATGRNANLLLLDEEGRILGVDRVITKEVNRYRELRPGLPYTPP
PPYRKLDPRTLAEEDLLPLLGKPLKEVIRHVDGVGQELLRELARRAGLTPETPLDEAGLGRVYRALKTLVEDPSLRTELS
EELRRRWAEEEKEALRKPLLEALDREIRTLKARLGDYQEALERLEEAEALRRRADLLLARLKEVPKGAEKVVLEGFDGKP
VEIPLDPALSPQENARKLYDRARRLEELAEKALDLIPKTEARIRELEAEKERLRTLDLEGLLALAQRPKGEKGLKVGLRY
TSPSGFLVLVGRNAKENDLLTRAAHSEDLWFHAQGVPGSHVILKTEGKNPPLEDLLFAARLAAYHSKARGERQVPVDYTR
KKHVWRPRKAAPGQVLYTQAKTLFVEGLLPEPREEA
>Mature_516_residues
MEGLLIHAVLRELEKELPAQNLGLAFPEEGTAAILLKGRTGRLFNLVLHYRPPTPSLALEPGRLQGEPKTPFQRQLQARV
KGPLVEASQLKLDRVAFFRFAGEKGFVDAPPSVLVLEATGRNANLLLLDEEGRILGVDRVITKEVNRYRELRPGLPYTPP
PPYRKLDPRTLAEEDLLPLLGKPLKEVIRHVDGVGQELLRELARRAGLTPETPLDEAGLGRVYRALKTLVEDPSLRTELS
EELRRRWAEEEKEALRKPLLEALDREIRTLKARLGDYQEALERLEEAEALRRRADLLLARLKEVPKGAEKVVLEGFDGKP
VEIPLDPALSPQENARKLYDRARRLEELAEKALDLIPKTEARIRELEAEKERLRTLDLEGLLALAQRPKGEKGLKVGLRY
TSPSGFLVLVGRNAKENDLLTRAAHSEDLWFHAQGVPGSHVILKTEGKNPPLEDLLFAARLAAYHSKARGERQVPVDYTR
KKHVWRPRKAAPGQVLYTQAKTLFVEGLLPEPREEA

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 58164; Mature: 58164

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLLIHAVLRELEKELPAQNLGLAFPEEGTAAILLKGRTGRLFNLVLHYRPPTPSLALE
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEC
PGRLQGEPKTPFQRQLQARVKGPLVEASQLKLDRVAFFRFAGEKGFVDAPPSVLVLEATG
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
RNANLLLLDEEGRILGVDRVITKEVNRYRELRPGLPYTPPPPYRKLDPRTLAEEDLLPLL
CCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GKPLKEVIRHVDGVGQELLRELARRAGLTPETPLDEAGLGRVYRALKTLVEDPSLRTELS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
EELRRRWAEEEKEALRKPLLEALDREIRTLKARLGDYQEALERLEEAEALRRRADLLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVPKGAEKVVLEGFDGKPVEIPLDPALSPQENARKLYDRARRLEELAEKALDLIPKTE
HHHCCCCCHHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ARIRELEAEKERLRTLDLEGLLALAQRPKGEKGLKVGLRYTSPSGFLVLVGRNAKENDLL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHH
TRAAHSEDLWFHAQGVPGSHVILKTEGKNPPLEDLLFAARLAAYHSKARGERQVPVDYTR
HHHCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
KKHVWRPRKAAPGQVLYTQAKTLFVEGLLPEPREEA
HHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEGLLIHAVLRELEKELPAQNLGLAFPEEGTAAILLKGRTGRLFNLVLHYRPPTPSLALE
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEC
PGRLQGEPKTPFQRQLQARVKGPLVEASQLKLDRVAFFRFAGEKGFVDAPPSVLVLEATG
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
RNANLLLLDEEGRILGVDRVITKEVNRYRELRPGLPYTPPPPYRKLDPRTLAEEDLLPLL
CCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GKPLKEVIRHVDGVGQELLRELARRAGLTPETPLDEAGLGRVYRALKTLVEDPSLRTELS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
EELRRRWAEEEKEALRKPLLEALDREIRTLKARLGDYQEALERLEEAEALRRRADLLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVPKGAEKVVLEGFDGKPVEIPLDPALSPQENARKLYDRARRLEELAEKALDLIPKTE
HHHCCCCCHHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ARIRELEAEKERLRTLDLEGLLALAQRPKGEKGLKVGLRYTSPSGFLVLVGRNAKENDLL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHH
TRAAHSEDLWFHAQGVPGSHVILKTEGKNPPLEDLLFAARLAAYHSKARGERQVPVDYTR
HHHCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
KKHVWRPRKAAPGQVLYTQAKTLFVEGLLPEPREEA
HHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]