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The map label for this gene is 55980563

Identifier: 55980563

GI number: 55980563

Start: 559972

End: 561048

Strand: Direct

Name: 55980563

Synonym: TTHA0594

Alternate gene names: NA

Gene position: 559972-561048 (Clockwise)

Preceding gene: 55980561

Following gene: 55980566

Centisome position: 30.27

GC content: 69.82

Gene sequence:

>1077_bases
ATGAAAAGGCGGAGCTTTCTCAGGAAGGTGGGCGTGGGCCTTGGGGCGAGCCTCTTCTACCGCGCCTTCGCCCAGGGGAG
CCCCACGGTGCGCTGGCGGCTTGTCTCCAGCTACCCGAGGAGCCTGGACACCCTCTACGGCGGGGCGGAGGAGCTGGCGA
AGCGGGTGGCGGAGCTCACCGGGGGGCGGTTCCAGATCCGGGTCTACCAGGCCGGGGAGCTCGTCCCTGGGGGGCAGGTG
CTGGACGCGGTGCAGCAGGGCACGGTGGAGGCCGGCCACACCTACGGTCCCTTCTACGTGGGCAAGAACCCGGCTTTGGC
CTTTGACGGAGGCGTCCCCTTCGGCCTGACCTACCGGCAGCACAACGCCTGGATGCTCATGGGCGGGGGGCTTGAGCTCC
TCCGCCGGGTCTACGCCGACTTCGGCGTCCTCCAGTTCCCCGGGGGGAACACCGGGACCCAGATGGGGGGCTGGTTCCGC
CGGGAGGTCCGCACCCTGGAGGACCTCAAGGGCCTCAGGATGCGCATCCCGGGCCTCGGCGGCCTCGTGATGGGGCGGCT
CGGGGTGGTGCCCCAGACGCTGGCGGCCGGGGACATCTACCCCGCCTTGGAGCGGGGGGCCATAGACGCCACCGAGTTCG
CCGGGCCCTACGACGACGAGAAGCTGGGCTTTTACAAGGTGGCCCGCTACTACTACTACCCCTCCTTCTGGGAGCCCAGC
GCCCAGCTCTCCTTCCTCGTGGCCCAAAGGGAGTGGGCGAGGCTTCCCAAGGAGTTCCAGGAGGCCTTCCAGGCGGCGGC
GAGCGAGGTGAACCTCACCATGATGGCCAAGTACGACGCCCTGAACCCGCCCGCCCTGAAGCGCCTCCTCGCGGCCGGGG
TGCGCCTAAGGAAGTGGCCCGCGGAGATCATGCGCAAGGCGGAGGAGGAGGCCCGAGCCCTCTACGAGGAGCAGGCGGCC
AAGGACCCGGGGTACCGCCGGGTCTACACCGCCTACTGGGCCTTCCGGGAGGAGGTCTTCCGCTGGTTCGCCGTGGCCGA
GCTGGGCTACCAGGCCTTCGCCTTCCCCTCGGTTTAG

Upstream 100 bases:

>100_bases
TCGGCGTCAATCAGGGGGCTTTCCAGGGGAAGCTCGGGGTACTGGAGCATGGCTTTATGCTACCCGCGAGGTGGTAGACT
GGGCAACGCCGGAGGCCACG

Downstream 100 bases:

>100_bases
AGGACCTTGAGGTCGGGGAAGCGCCGGGCCAGGGCCTCCCTGAAGGCGGGGAAGCGGCTTTCGGCCACCAGGGCCACCAC
GGCCCCGCCGAAGCCCGCCC

Product: periplasmid solute-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKRRSFLRKVGVGLGASLFYRAFAQGSPTVRWRLVSSYPRSLDTLYGGAEELAKRVAELTGGRFQIRVYQAGELVPGGQV
LDAVQQGTVEAGHTYGPFYVGKNPALAFDGGVPFGLTYRQHNAWMLMGGGLELLRRVYADFGVLQFPGGNTGTQMGGWFR
REVRTLEDLKGLRMRIPGLGGLVMGRLGVVPQTLAAGDIYPALERGAIDATEFAGPYDDEKLGFYKVARYYYYPSFWEPS
AQLSFLVAQREWARLPKEFQEAFQAAASEVNLTMMAKYDALNPPALKRLLAAGVRLRKWPAEIMRKAEEEARALYEEQAA
KDPGYRRVYTAYWAFREEVFRWFAVAELGYQAFAFPSV

Sequences:

>Translated_358_residues
MKRRSFLRKVGVGLGASLFYRAFAQGSPTVRWRLVSSYPRSLDTLYGGAEELAKRVAELTGGRFQIRVYQAGELVPGGQV
LDAVQQGTVEAGHTYGPFYVGKNPALAFDGGVPFGLTYRQHNAWMLMGGGLELLRRVYADFGVLQFPGGNTGTQMGGWFR
REVRTLEDLKGLRMRIPGLGGLVMGRLGVVPQTLAAGDIYPALERGAIDATEFAGPYDDEKLGFYKVARYYYYPSFWEPS
AQLSFLVAQREWARLPKEFQEAFQAAASEVNLTMMAKYDALNPPALKRLLAAGVRLRKWPAEIMRKAEEEARALYEEQAA
KDPGYRRVYTAYWAFREEVFRWFAVAELGYQAFAFPSV
>Mature_358_residues
MKRRSFLRKVGVGLGASLFYRAFAQGSPTVRWRLVSSYPRSLDTLYGGAEELAKRVAELTGGRFQIRVYQAGELVPGGQV
LDAVQQGTVEAGHTYGPFYVGKNPALAFDGGVPFGLTYRQHNAWMLMGGGLELLRRVYADFGVLQFPGGNTGTQMGGWFR
REVRTLEDLKGLRMRIPGLGGLVMGRLGVVPQTLAAGDIYPALERGAIDATEFAGPYDDEKLGFYKVARYYYYPSFWEPS
AQLSFLVAQREWARLPKEFQEAFQAAASEVNLTMMAKYDALNPPALKRLLAAGVRLRKWPAEIMRKAEEEARALYEEQAA
KDPGYRRVYTAYWAFREEVFRWFAVAELGYQAFAFPSV

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40116; Mature: 40116

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSFLRKVGVGLGASLFYRAFAQGSPTVRWRLVSSYPRSLDTLYGGAEELAKRVAELT
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHCCCHHHHHHHHHHHC
GGRFQIRVYQAGELVPGGQVLDAVQQGTVEAGHTYGPFYVGKNPALAFDGGVPFGLTYRQ
CCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEE
HNAWMLMGGGLELLRRVYADFGVLQFPGGNTGTQMGGWFRREVRTLEDLKGLRMRIPGLG
CCCEEEECCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCC
GLVMGRLGVVPQTLAAGDIYPALERGAIDATEFAGPYDDEKLGFYKVARYYYYPSFWEPS
HHHHHHHCCCCHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
AQLSFLVAQREWARLPKEFQEAFQAAASEVNLTMMAKYDALNPPALKRLLAAGVRLRKWP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCHHHHHH
AEIMRKAEEEARALYEEQAAKDPGYRRVYTAYWAFREEVFRWFAVAELGYQAFAFPSV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
>Mature Secondary Structure
MKRRSFLRKVGVGLGASLFYRAFAQGSPTVRWRLVSSYPRSLDTLYGGAEELAKRVAELT
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHCCCHHHHHHHHHHHC
GGRFQIRVYQAGELVPGGQVLDAVQQGTVEAGHTYGPFYVGKNPALAFDGGVPFGLTYRQ
CCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEE
HNAWMLMGGGLELLRRVYADFGVLQFPGGNTGTQMGGWFRREVRTLEDLKGLRMRIPGLG
CCCEEEECCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCC
GLVMGRLGVVPQTLAAGDIYPALERGAIDATEFAGPYDDEKLGFYKVARYYYYPSFWEPS
HHHHHHHCCCCHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
AQLSFLVAQREWARLPKEFQEAFQAAASEVNLTMMAKYDALNPPALKRLLAAGVRLRKWP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCHHHHHH
AEIMRKAEEEARALYEEQAAKDPGYRRVYTAYWAFREEVFRWFAVAELGYQAFAFPSV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA