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The map label for this gene is hspR [H]

Identifier: 55980477

GI number: 55980477

Start: 473046

End: 473747

Strand: Direct

Name: hspR [H]

Synonym: TTHA0508

Alternate gene names: 55980477

Gene position: 473046-473747 (Clockwise)

Preceding gene: 55980476

Following gene: 55980478

Centisome position: 25.57

GC content: 66.52

Gene sequence:

>702_bases
ATGGACAAGGTGGTGGACAAGGACCGCCCCGTGTACGTGATCTCGGTGGCGGCGGAGCTTGTGGAGATGCACCCGCAGAC
GCTTCGGCTTTACGAGCGGAAGGGTTTGATCAAGCCGAAGCGGTCCAGTGGGAAGACGCGGCTTTACTCGGAGCGGGACA
TTGAGAAGCTCCGGGAGATCCGCCGCCTGACGCAGGAGCTTGGGGTGAACCTGGCGGGGGTGGAGGAGATCATGCGGCTT
CGGGCGGAGCTCGAGGCCCTGCAGGCCCGCTTTGAGGCCGAGGTGGCCAGGCTCAAGGCGGAGATCGGGGACCGCTTCCA
GGAGCTGGAGCGGAGGGCCCTGCCCCCGCCCGGGCAGACGGAGAAGCCCTCCCCCAAGGACCGCCCCGTGTACGTGATCT
CGGTGGCGGCGGAGCTTGTGGAGATGCACCCGCAGACGCTTCGGCTTTACGAGCGGAAGGGTTTGATCAAGCCGAAGCGG
TCCAGTGGGAAGACGCGGCTTTACTCGGAGCGGGACATTGAGAAGCTCCGGGAGATCCGCCGCCTGACGCAGGAGCTTGG
GGTGAACCTGGCGGGGGTGGAGGAGATCATGCGGCTTCGGGCGGAGCTCGAGGCCCTGCAGGCCCGCTTTGAGGCCGAGG
TGGCCAGGCTCAAGCTCCTCCTCTTGGAGAAGGAGAAGGAGGAGGCCTTGGGCGGGGGCTGA

Upstream 100 bases:

>100_bases
GGTGGTGGAGGCGGCCCGGAGAGCTTCCCTGCGCCTCGGGTACACAGGCGAGGTATAGTGTTTAAGGATAGAGGGGCTTA
GCGGGAGGAGCTAAGGGCTT

Downstream 100 bases:

>100_bases
GGGCCCCCCTCTGCGCTCCCCGGTTGCGGGAACGCGGTGCGGGCGTTTAGGGTGTCCTCGTGGACCTCACCGAGCTTTTT
GCCTTTCTCTCCATCCCCTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDKVVDKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRL
RAELEALQARFEAEVARLKAEIGDRFQELERRALPPPGQTEKPSPKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKR
SSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKLLLLEKEKEEALGGG

Sequences:

>Translated_233_residues
MDKVVDKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRL
RAELEALQARFEAEVARLKAEIGDRFQELERRALPPPGQTEKPSPKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKR
SSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKLLLLEKEKEEALGGG
>Mature_233_residues
MDKVVDKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRL
RAELEALQARFEAEVARLKAEIGDRFQELERRALPPPGQTEKPSPKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKR
SSGKTRLYSERDIEKLREIRRLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKLLLLEKEKEEALGGG

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 26872; Mature: 26872

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVVDKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREI
CCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RRLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKAEIGDRFQELERRALPPPGQT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EKPSPKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREIR
CCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKLLLLEKEKEEALGGG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDKVVDKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREI
CCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RRLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKAEIGDRFQELERRALPPPGQT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EKPSPKDRPVYVISVAAELVEMHPQTLRLYERKGLIKPKRSSGKTRLYSERDIEKLREIR
CCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLTQELGVNLAGVEEIMRLRAELEALQARFEAEVARLKLLLLEKEKEEALGGG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]