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The map label for this gene is 55980467

Identifier: 55980467

GI number: 55980467

Start: 464249

End: 464647

Strand: Reverse

Name: 55980467

Synonym: TTHA0498

Alternate gene names: NA

Gene position: 464647-464249 (Counterclockwise)

Preceding gene: 55980468

Following gene: 55980466

Centisome position: 25.12

GC content: 63.41

Gene sequence:

>399_bases
ATGCCCCGTGAAGCCACAGATCCCTTGGCTTGGCTCGTCCGGGCCAAGAGCAGTCTGGCCCGGGCCCGAGCCGGGCGAAT
AAGCCCTGAAGTCCTTTGGGAAGAACCTTGCTTTGACGCGCAACAGGCTGCAGAAAAGGCCCTCAAAGCTCTTCTGGTTG
CCTTAGGCATACCTTTTCCCAAGACCCACGACCTGGAAAGGCTCCTGGAGCTGATCCGCCCCCGTATCCCCGTGCCCCTA
GAGCTGGAAGCCCTTGTCCGGCTCAACCCCTTTGCCGTCGCCAGCCGCTACCCAGGGGACCTCCCGGAAGCCACGGAAGA
GGACTGGAGGGAAGCTCTCGCGCTCGCGGAGCGGGCCGTGGCCTGGGTGGAGGAGGTCTTAAAAAGCAGCCGTGGCTAG

Upstream 100 bases:

>100_bases
AGTCTGGACCTCCTGCTGGCCACCGCGGAGGACCTGGAAAAGTACCGGGATGCCTGGGCCACCCTTTACCCCAAGGTCCT
GAGGGAAGGCCGGGTGCTCT

Downstream 100 bases:

>100_bases
CCTCTACGTCCACGTCCCCTTCTGCCCCACCCTCTGCCCCTACTGCGACTTCCACGTGGTCCGCCGGGGGCCGGGGTGGG
TGGAGGCCTACCTAAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPREATDPLAWLVRAKSSLARARAGRISPEVLWEEPCFDAQQAAEKALKALLVALGIPFPKTHDLERLLELIRPRIPVPL
ELEALVRLNPFAVASRYPGDLPEATEEDWREALALAERAVAWVEEVLKSSRG

Sequences:

>Translated_132_residues
MPREATDPLAWLVRAKSSLARARAGRISPEVLWEEPCFDAQQAAEKALKALLVALGIPFPKTHDLERLLELIRPRIPVPL
ELEALVRLNPFAVASRYPGDLPEATEEDWREALALAERAVAWVEEVLKSSRG
>Mature_131_residues
PREATDPLAWLVRAKSSLARARAGRISPEVLWEEPCFDAQQAAEKALKALLVALGIPFPKTHDLERLLELIRPRIPVPLE
LEALVRLNPFAVASRYPGDLPEATEEDWREALALAERAVAWVEEVLKSSRG

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14742; Mature: 14611

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREATDPLAWLVRAKSSLARARAGRISPEVLWEEPCFDAQQAAEKALKALLVALGIPFP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
KTHDLERLLELIRPRIPVPLELEALVRLNPFAVASRYPGDLPEATEEDWREALALAERAV
CCCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AWVEEVLKSSRG
HHHHHHHHHCCC
>Mature Secondary Structure 
PREATDPLAWLVRAKSSLARARAGRISPEVLWEEPCFDAQQAAEKALKALLVALGIPFP
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
KTHDLERLLELIRPRIPVPLELEALVRLNPFAVASRYPGDLPEATEEDWREALALAERAV
CCCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AWVEEVLKSSRG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA