| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is pgk2 [H]
Identifier: 55980464
GI number: 55980464
Start: 461039
End: 462466
Strand: Reverse
Name: pgk2 [H]
Synonym: TTHA0495
Alternate gene names: 55980464
Gene position: 462466-461039 (Counterclockwise)
Preceding gene: 55980466
Following gene: 55980463
Centisome position: 25.0
GC content: 70.45
Gene sequence:
>1428_bases GTGCGCCTGCGCCGCGGACGCTGGCCCCTTTCCAAGGGGCTTTTGGTGGAGGCCCTCCTTCCCCTGGGGGTCCCCACGGA GGTGGCCCACGCCCTGGCCCACACGGTGGAGGAGCGGCTCAAGCGCCTCAGGCGCAAGGGCGGGGTGACGCCCCGGACCC TGAGGCGGATCTTCCTGGAGGAGGTGGAGCGGGAGCTTGGGCCGGAGAAGGCCCGCCTCCTCGCCAAGCAGACCCTCCCC TTTGAGGAGATCTTCGTGGTGGAGGGCAGAAAGCAACGCCCCTTCTCCAAGGGCCTCCTCACCCGGAGCCTCGAGGACGC GGGCTTCTCCCTCAGGGAGGCGCACGAGCTGGCCAAGGCCGTGGAAAGGCGGCTCCGCCTGGAGGGCGTCCGCCGTATCC CCGCCAAGCGGCTGGAAAAAGTGGTGGCCGAGGAGGCCCGGCGCCTCTACGGCCCCGAGGCGGGGGAGCGCTACCGGGCC CGCCTCCTCTACGCCGGGGAGCTCTTCGTGGAGGAGGCCCCGGGGGCGCCCAGGGTCCCCTTTTCCAAAGGCATCCTGGC CCAGTCCCTCATGGCCATCGGCCTCTCCCCCGACCGGGCCTTCCGGCTCGCGCGGGAGATGGAGGTGGCCCTCCACCGGG AAGGCGTCCAGGTCATCCGCCGGGACGAGCTGAGGCGGCGGGTGCACCAGGCCCTCCTCCGGGAGGCGGGGGAGGAGATG GCCCGCCGCTACCTGATCCTGCGGAGCCTGCGCAAGCAACCCCGGCCCGTCCACATCCTCATCGGGGGGGTCACGGGGGT GGGCAAGAGCGTCCTCGCCTCGGCCTTGGCCTACCGCCTGGGCATCACCCACATCGTCCCCTCGGACGCCGTCAGGGAGG TCTTCCGCGTCTCCCTCTCCAAGGACCTCCTCCCCACCCTCCACCTCTCCACCTTTGAGGCCTGGCGCGCCCTCTCCCCC GGGCTCGGCCTCGAGGGGGAAAGCTACGAGGTCCAGGTGATGCGGGGGTTTTTAGACCAGGTGGCCAAGGTGGCCGTGGG CCTCAAGGCCATCCAGGAGAGGAGCGCCCTGGAGGGCACCTCCATCGTCTTGGAAGGGGTCCACGTGGTGCCCCGCTTCC TGCAGCACCCCTACCAGGACCGGGTCTTCACCATCCCCATGCTCGTGGCGGTGCAGGACGAGAACCTGCACCGGGACCGC TTCCTCCTCCGCGACCGGGAGACGGGGCACGCCCGGCCCAAGGAGCGCTACCTCCAGCACTTTGAGGAGATCCGCCTCAT CCAAAACCACCTCCTGCGTTGGGCCCGGGAGGAGGGGATCCCCGTGATCCCGGGGGAGGACCTGGACGAGGGGATTGAGA AGGCCTTGGAGGTCCTGGTGGCCTACCTCGAGGCCCAGGGGCAGAGGCTGGAGGAGGCCCATGCTTGA
Upstream 100 bases:
>100_bases AAGCCGTAAGGTATGGTAGCACGAAGCCCCAAAGGGTGTCAAGAAAAACCCGTTGCCAGCGGGAAAAGTGGTATCATGCC CTCTAGTGGACGAGGTTTTC
Downstream 100 bases:
>100_bases ACCCCTCCTCTTCCCCCTCCTCCTCGCCGTGGCCTTCCGCCTGAGGCGGCTCGCCCCCCTCTTCGCCCTAGGGTTTTGGG CCAACCTCCTCTGGTTCGTC
Product: 2-phosphoglycerate kinase
Products: NA
Alternate protein names: 2PGK [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MRLRRGRWPLSKGLLVEALLPLGVPTEVAHALAHTVEERLKRLRRKGGVTPRTLRRIFLEEVERELGPEKARLLAKQTLP FEEIFVVEGRKQRPFSKGLLTRSLEDAGFSLREAHELAKAVERRLRLEGVRRIPAKRLEKVVAEEARRLYGPEAGERYRA RLLYAGELFVEEAPGAPRVPFSKGILAQSLMAIGLSPDRAFRLAREMEVALHREGVQVIRRDELRRRVHQALLREAGEEM ARRYLILRSLRKQPRPVHILIGGVTGVGKSVLASALAYRLGITHIVPSDAVREVFRVSLSKDLLPTLHLSTFEAWRALSP GLGLEGESYEVQVMRGFLDQVAKVAVGLKAIQERSALEGTSIVLEGVHVVPRFLQHPYQDRVFTIPMLVAVQDENLHRDR FLLRDRETGHARPKERYLQHFEEIRLIQNHLLRWAREEGIPVIPGEDLDEGIEKALEVLVAYLEAQGQRLEEAHA
Sequences:
>Translated_475_residues MRLRRGRWPLSKGLLVEALLPLGVPTEVAHALAHTVEERLKRLRRKGGVTPRTLRRIFLEEVERELGPEKARLLAKQTLP FEEIFVVEGRKQRPFSKGLLTRSLEDAGFSLREAHELAKAVERRLRLEGVRRIPAKRLEKVVAEEARRLYGPEAGERYRA RLLYAGELFVEEAPGAPRVPFSKGILAQSLMAIGLSPDRAFRLAREMEVALHREGVQVIRRDELRRRVHQALLREAGEEM ARRYLILRSLRKQPRPVHILIGGVTGVGKSVLASALAYRLGITHIVPSDAVREVFRVSLSKDLLPTLHLSTFEAWRALSP GLGLEGESYEVQVMRGFLDQVAKVAVGLKAIQERSALEGTSIVLEGVHVVPRFLQHPYQDRVFTIPMLVAVQDENLHRDR FLLRDRETGHARPKERYLQHFEEIRLIQNHLLRWAREEGIPVIPGEDLDEGIEKALEVLVAYLEAQGQRLEEAHA >Mature_475_residues MRLRRGRWPLSKGLLVEALLPLGVPTEVAHALAHTVEERLKRLRRKGGVTPRTLRRIFLEEVERELGPEKARLLAKQTLP FEEIFVVEGRKQRPFSKGLLTRSLEDAGFSLREAHELAKAVERRLRLEGVRRIPAKRLEKVVAEEARRLYGPEAGERYRA RLLYAGELFVEEAPGAPRVPFSKGILAQSLMAIGLSPDRAFRLAREMEVALHREGVQVIRRDELRRRVHQALLREAGEEM ARRYLILRSLRKQPRPVHILIGGVTGVGKSVLASALAYRLGITHIVPSDAVREVFRVSLSKDLLPTLHLSTFEAWRALSP GLGLEGESYEVQVMRGFLDQVAKVAVGLKAIQERSALEGTSIVLEGVHVVPRFLQHPYQDRVFTIPMLVAVQDENLHRDR FLLRDRETGHARPKERYLQHFEEIRLIQNHLLRWAREEGIPVIPGEDLDEGIEKALEVLVAYLEAQGQRLEEAHA
Specific function: Unknown
COG id: COG2074
COG function: function code G; 2-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-cone domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020872 - InterPro: IPR005144 [H]
Pfam domain/function: PF03477 ATP-cone [H]
EC number: NA
Molecular weight: Translated: 54080; Mature: 54080
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS51161 ATP_CONE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRRGRWPLSKGLLVEALLPLGVPTEVAHALAHTVEERLKRLRRKGGVTPRTLRRIFLE CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EVERELGPEKARLLAKQTLPFEEIFVVEGRKQRPFSKGLLTRSLEDAGFSLREAHELAKA HHHHHHCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH VERRLRLEGVRRIPAKRLEKVVAEEARRLYGPEAGERYRARLLYAGELFVEEAPGAPRVP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC FSKGILAQSLMAIGLSPDRAFRLAREMEVALHREGVQVIRRDELRRRVHQALLREAGEEM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRYLILRSLRKQPRPVHILIGGVTGVGKSVLASALAYRLGITHIVPSDAVREVFRVSLS HHHHHHHHHHHCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KDLLPTLHLSTFEAWRALSPGLGLEGESYEVQVMRGFLDQVAKVAVGLKAIQERSALEGT HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SIVLEGVHVVPRFLQHPYQDRVFTIPMLVAVQDENLHRDRFLLRDRETGHARPKERYLQH HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHH FEEIRLIQNHLLRWAREEGIPVIPGEDLDEGIEKALEVLVAYLEAQGQRLEEAHA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLRRGRWPLSKGLLVEALLPLGVPTEVAHALAHTVEERLKRLRRKGGVTPRTLRRIFLE CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EVERELGPEKARLLAKQTLPFEEIFVVEGRKQRPFSKGLLTRSLEDAGFSLREAHELAKA HHHHHHCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH VERRLRLEGVRRIPAKRLEKVVAEEARRLYGPEAGERYRARLLYAGELFVEEAPGAPRVP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC FSKGILAQSLMAIGLSPDRAFRLAREMEVALHREGVQVIRRDELRRRVHQALLREAGEEM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRYLILRSLRKQPRPVHILIGGVTGVGKSVLASALAYRLGITHIVPSDAVREVFRVSLS HHHHHHHHHHHCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KDLLPTLHLSTFEAWRALSPGLGLEGESYEVQVMRGFLDQVAKVAVGLKAIQERSALEGT HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SIVLEGVHVVPRFLQHPYQDRVFTIPMLVAVQDENLHRDRFLLRDRETGHARPKERYLQH HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHH FEEIRLIQNHLLRWAREEGIPVIPGEDLDEGIEKALEVLVAYLEAQGQRLEEAHA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]