| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980461
Identifier: 55980461
GI number: 55980461
Start: 460128
End: 460436
Strand: Direct
Name: 55980461
Synonym: TTHA0492
Alternate gene names: NA
Gene position: 460128-460436 (Clockwise)
Preceding gene: 55980460
Following gene: 55980462
Centisome position: 24.88
GC content: 69.58
Gene sequence:
>309_bases ATGGCCGAGCGCGCCCGCAAGAAAGTCCCCGAGCCTTTTCCCGGGGCCTACTACCTGGCCGGGGCCATCACCGTCGCTCT GATGCTCCTCTTCCTGGCCCTGGGGGCGAGCCTGCCCCCGGGGGTGGCGGGGTTTCTCGTGGCCTTCGTCCTGGGCCTCA CCGTGAGCCCCAGGTACGTGCCCTTCTTCCTCCTGGCCGGGGTCTTCTCGGCGGTCATGGGCTTTTTGGGGCGCGAGCCC CAGGTGGCCTGGGGGGGTGTGGCCCTCGTCCTCTCCCAGCTTGTGGTGCGCCGCTTCGTGAAGGACTGA
Upstream 100 bases:
>100_bases CCCGGCCACCGCCGAGAGGGTGGCCGAGCTTCCCCCGCCCGTGCCCGCCCGCCTCGAGGCGGTGGCCGCGGCCGCGGGGC TTTTGTGATAGCCTTGGGGC
Downstream 100 bases:
>100_bases GGATGGGTCCAGACCGCCTCTCCCAGGCCCTCTCCCTCCTCGGGATCGCGGGCTACGTCTACTTCCTCTGGTTCCGCCCG AACCAGGAAGGCCTCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREP QVAWGGVALVLSQLVVRRFVKD
Sequences:
>Translated_102_residues MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREP QVAWGGVALVLSQLVVRRFVKD >Mature_101_residues AERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREPQ VAWGGVALVLSQLVVRRFVKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10853; Mature: 10722
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYV CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH PFFLLAGVFSAVMGFLGREPQVAWGGVALVLSQLVVRRFVKD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYV CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH PFFLLAGVFSAVMGFLGREPQVAWGGVALVLSQLVVRRFVKD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA