Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55980461

Identifier: 55980461

GI number: 55980461

Start: 460128

End: 460436

Strand: Direct

Name: 55980461

Synonym: TTHA0492

Alternate gene names: NA

Gene position: 460128-460436 (Clockwise)

Preceding gene: 55980460

Following gene: 55980462

Centisome position: 24.88

GC content: 69.58

Gene sequence:

>309_bases
ATGGCCGAGCGCGCCCGCAAGAAAGTCCCCGAGCCTTTTCCCGGGGCCTACTACCTGGCCGGGGCCATCACCGTCGCTCT
GATGCTCCTCTTCCTGGCCCTGGGGGCGAGCCTGCCCCCGGGGGTGGCGGGGTTTCTCGTGGCCTTCGTCCTGGGCCTCA
CCGTGAGCCCCAGGTACGTGCCCTTCTTCCTCCTGGCCGGGGTCTTCTCGGCGGTCATGGGCTTTTTGGGGCGCGAGCCC
CAGGTGGCCTGGGGGGGTGTGGCCCTCGTCCTCTCCCAGCTTGTGGTGCGCCGCTTCGTGAAGGACTGA

Upstream 100 bases:

>100_bases
CCCGGCCACCGCCGAGAGGGTGGCCGAGCTTCCCCCGCCCGTGCCCGCCCGCCTCGAGGCGGTGGCCGCGGCCGCGGGGC
TTTTGTGATAGCCTTGGGGC

Downstream 100 bases:

>100_bases
GGATGGGTCCAGACCGCCTCTCCCAGGCCCTCTCCCTCCTCGGGATCGCGGGCTACGTCTACTTCCTCTGGTTCCGCCCG
AACCAGGAAGGCCTCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREP
QVAWGGVALVLSQLVVRRFVKD

Sequences:

>Translated_102_residues
MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREP
QVAWGGVALVLSQLVVRRFVKD
>Mature_101_residues
AERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYVPFFLLAGVFSAVMGFLGREPQ
VAWGGVALVLSQLVVRRFVKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10853; Mature: 10722

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYV
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH
PFFLLAGVFSAVMGFLGREPQVAWGGVALVLSQLVVRRFVKD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AERARKKVPEPFPGAYYLAGAITVALMLLFLALGASLPPGVAGFLVAFVLGLTVSPRYV
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH
PFFLLAGVFSAVMGFLGREPQVAWGGVALVLSQLVVRRFVKD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA