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The map label for this gene is 55980456

Identifier: 55980456

GI number: 55980456

Start: 456808

End: 457200

Strand: Reverse

Name: 55980456

Synonym: TTHA0487

Alternate gene names: NA

Gene position: 457200-456808 (Counterclockwise)

Preceding gene: 55980457

Following gene: 55980455

Centisome position: 24.72

GC content: 68.45

Gene sequence:

>393_bases
GTGGGAAGGCGCTACCTCCTAGACACCCACGTCCTCATCTGGGCCCTCACGGAACCCGAGCGGCTGAGCCCTAGGGTCCG
GGCGCTTTTGGAGGACCCCGACACCCCTCTTCTCGTCTCCTCAGCCAGCGCCTGGGAGATGGCCACCAAGCACCGCCTAG
GGAAGCTTTCCGGCGCCGAGGCGGTCTTGGAGGGCCTGGAAGGCCACCTCTCCCGTCTGGGGGCCGAGGAGCTTCCCATA
AGGCTTGCCCACGCCCTCCTGGCGGGAAGGCTTCCCGGGGAGCAGCGGGACCCCTTTGACCGCATCCTGGCCGCCCAGAG
CCTGGTGGAAGGCCTCGTCCTCCTCACCACCGACCGCGCCTTCCCCAGTTTCGGCGTGGAGACCCTGTGGTGA

Upstream 100 bases:

>100_bases
GGCTCGTCCCCTACCGCAAGGGGAAGCGCCCCCTGGGGTTTGTCCCGGGGAAGCTCCCTGAGAGCTTCTTTGAACCCCTT
CCCGAGGAGGAGCTCGCCCT

Downstream 100 bases:

>100_bases
AGGACCTCCTGGAGGAACGGGCGCGGGAGCTCGGCCTCCTCTTCGCCTGGGCCCCCCTGGACCTGCCCCAAGAGGCCGAG
GCCCGCCACCGGGCGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like Protein; PilT Protein-Like; PilT Protein Domain Containing Protein; PIN Domain Protein; Pilus Retraction Motor Protein PilT; Pilt Protein Domain Protein; PIN Domain Family Protein; Xin Of A Toxin/Antitoxin System; PilT Protein N-Terminal

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGRRYLLDTHVLIWALTEPERLSPRVRALLEDPDTPLLVSSASAWEMATKHRLGKLSGAEAVLEGLEGHLSRLGAEELPI
RLAHALLAGRLPGEQRDPFDRILAAQSLVEGLVLLTTDRAFPSFGVETLW

Sequences:

>Translated_130_residues
MGRRYLLDTHVLIWALTEPERLSPRVRALLEDPDTPLLVSSASAWEMATKHRLGKLSGAEAVLEGLEGHLSRLGAEELPI
RLAHALLAGRLPGEQRDPFDRILAAQSLVEGLVLLTTDRAFPSFGVETLW
>Mature_129_residues
GRRYLLDTHVLIWALTEPERLSPRVRALLEDPDTPLLVSSASAWEMATKHRLGKLSGAEAVLEGLEGHLSRLGAEELPIR
LAHALLAGRLPGEQRDPFDRILAAQSLVEGLVLLTTDRAFPSFGVETLW

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14342; Mature: 14211

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRYLLDTHVLIWALTEPERLSPRVRALLEDPDTPLLVSSASAWEMATKHRLGKLSGAE
CCCCEEEECEEEEEEECCCHHHCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCHH
AVLEGLEGHLSRLGAEELPIRLAHALLAGRLPGEQRDPFDRILAAQSLVEGLVLLTTDRA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCC
FPSFGVETLW
CCCCCCCCCC
>Mature Secondary Structure 
GRRYLLDTHVLIWALTEPERLSPRVRALLEDPDTPLLVSSASAWEMATKHRLGKLSGAE
CCCEEEECEEEEEEECCCHHHCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCHH
AVLEGLEGHLSRLGAEELPIRLAHALLAGRLPGEQRDPFDRILAAQSLVEGLVLLTTDRA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCC
FPSFGVETLW
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA