| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is acuC [H]
Identifier: 55980444
GI number: 55980444
Start: 444268
End: 445392
Strand: Direct
Name: acuC [H]
Synonym: TTHA0475
Alternate gene names: 55980444
Gene position: 444268-445392 (Clockwise)
Preceding gene: 55980443
Following gene: 55980445
Centisome position: 24.02
GC content: 69.07
Gene sequence:
>1125_bases ATGGTGATCTACCGGGAGGAGTACCGCCTCTACAACTTCGGGCCCGACCACCCCTTTAGCCCCGTCCGCCTGGAAATGCT CACCTCCCTCCTCCAGGCCCTCGGGGTGTGGCGGGCGCCCCTTAGCCCCCCTGAGGCCTCGAGGGAGGAGGTGCTTTCGG TCCACTCCGAGCGCCTGGTAAAGCGGGTGGAGGCGGCGAGCCGGGGAGAGCTTTACCCCGACCTGGAGCACTACCTGGGC ACGGGGGACACCCCCGTCTTCCCCGGCATGGACCGGGCGGCCCGGATCCTGGTGGGGGGGACCCTGGAGGGGGCGAGAAG GATTATGGCCGGGGAAAAGCGGGTCTTGCAGCTGGGCGGGGGTCTCCACCACGCCCAGTACGACCGCGCCTCGGGGTTTT GCGTCTACAACGACCTCTCCGTGGCTATCCGCCACATGACCCAGGTTGGGCTTCGCGTGGCCTACGTGGACATTGACGTC CACCACGGGGACGGGGTGCAGTGGATCCACTACGAGGAGGGGGAGGTCCTCACCCTAAGCCTCCACGAGTCGGGACGCTA CCTCTTCCCGGGGACGGGGCACGTCTACGAGATCGGCCGGGGGGCGGGCCTGGGGAAGAAGCTCAACCTCCCCCTGGAGC CCTTCACCGAGGACGAAAGCTACCTCGAGGTCTTTGAGGCCCTGGTGCCCTGGGCCCTTAAGGCCTTCCGCCCCGACGTC CTCGTGGTCCAGGCGGGGGCGGACGCCCACTACCTGGACCCCTTGGCCGACCTCCTCCTCACCGCCCGGGCCTACGAGAG GCTTTTCCGCCTCCTCCTGGAGTACGCCGAGGCCTACGCCGGGGGAAGGGTCCTCTTCACCTTGGGGGGCGGGTACAGCC TGGACGGGACGGTGAGGGTCTGGGCCCTCCTCTACCACCTCTTCCACGGCCTTCCCCTGCCCGAGCGCCTTCCCGAGGGG TGGCTTAGGACCTGGGAGGCGCGGCTCGGCAGGCCCCTCACCCCCACCCTCCACGACCCCGAAGGGGCCTACCCGGAGAT CCCCAGGCGGGAGGAGATCGCGAAGCGGAACCGCCTGACCTTGCAGCGGCTCACGGAGCTCGTGGCCCCCCACCTGCTAC ACTAG
Upstream 100 bases:
>100_bases TCGTGCGGGCGGTGGTGCGGGTGAACACCCTGGAGACCCACCTCCTGGCGGAGGCCCTCCGCCGGGAGGGGTTTGACGTC CTCTGGCCCCCCAAAAAGCC
Downstream 100 bases:
>100_bases CGGGGTGAGGGTCGTTCTGCGCCTGCCCGAGCGCAAGGAGGTGGAGGTCAAGGGGAACCGGCCCTTAAGGGAGGTTCTGG AGGAGCTTGGCCTGAACCCG
Product: acetoin utilization protein AcuC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MVIYREEYRLYNFGPDHPFSPVRLEMLTSLLQALGVWRAPLSPPEASREEVLSVHSERLVKRVEAASRGELYPDLEHYLG TGDTPVFPGMDRAARILVGGTLEGARRIMAGEKRVLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTQVGLRVAYVDIDV HHGDGVQWIHYEEGEVLTLSLHESGRYLFPGTGHVYEIGRGAGLGKKLNLPLEPFTEDESYLEVFEALVPWALKAFRPDV LVVQAGADAHYLDPLADLLLTARAYERLFRLLLEYAEAYAGGRVLFTLGGGYSLDGTVRVWALLYHLFHGLPLPERLPEG WLRTWEARLGRPLTPTLHDPEGAYPEIPRREEIAKRNRLTLQRLTELVAPHLLH
Sequences:
>Translated_374_residues MVIYREEYRLYNFGPDHPFSPVRLEMLTSLLQALGVWRAPLSPPEASREEVLSVHSERLVKRVEAASRGELYPDLEHYLG TGDTPVFPGMDRAARILVGGTLEGARRIMAGEKRVLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTQVGLRVAYVDIDV HHGDGVQWIHYEEGEVLTLSLHESGRYLFPGTGHVYEIGRGAGLGKKLNLPLEPFTEDESYLEVFEALVPWALKAFRPDV LVVQAGADAHYLDPLADLLLTARAYERLFRLLLEYAEAYAGGRVLFTLGGGYSLDGTVRVWALLYHLFHGLPLPERLPEG WLRTWEARLGRPLTPTLHDPEGAYPEIPRREEIAKRNRLTLQRLTELVAPHLLH >Mature_374_residues MVIYREEYRLYNFGPDHPFSPVRLEMLTSLLQALGVWRAPLSPPEASREEVLSVHSERLVKRVEAASRGELYPDLEHYLG TGDTPVFPGMDRAARILVGGTLEGARRIMAGEKRVLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTQVGLRVAYVDIDV HHGDGVQWIHYEEGEVLTLSLHESGRYLFPGTGHVYEIGRGAGLGKKLNLPLEPFTEDESYLEVFEALVPWALKAFRPDV LVVQAGADAHYLDPLADLLLTARAYERLFRLLLEYAEAYAGGRVLFTLGGGYSLDGTVRVWALLYHLFHGLPLPERLPEG WLRTWEARLGRPLTPTLHDPEGAYPEIPRREEIAKRNRLTLQRLTELVAPHLLH
Specific function: Role in growth and sporulation on acetoin or butanediol. Involved in the breakdown of these compounds used as a carbon source [H]
COG id: COG0123
COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histone deacetylase family [H]
Homologues:
Organism=Homo sapiens, GI13128862, Length=314, Percent_Identity=32.484076433121, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI13128860, Length=314, Percent_Identity=31.2101910828025, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI293336691, Length=314, Percent_Identity=31.2101910828025, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI8923769, Length=305, Percent_Identity=32.1311475409836, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI262073088, Length=199, Percent_Identity=34.1708542713568, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI262073092, Length=218, Percent_Identity=33.9449541284404, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI17158039, Length=216, Percent_Identity=35.1851851851852, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI30795202, Length=216, Percent_Identity=35.1851851851852, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI30795204, Length=216, Percent_Identity=35.1851851851852, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI13128864, Length=297, Percent_Identity=31.6498316498317, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI153085395, Length=244, Percent_Identity=34.4262295081967, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI20070354, Length=288, Percent_Identity=34.0277777777778, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI169234807, Length=182, Percent_Identity=35.7142857142857, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI148539870, Length=182, Percent_Identity=35.7142857142857, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI62750349, Length=219, Percent_Identity=36.986301369863, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI62750347, Length=217, Percent_Identity=37.3271889400922, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI226529806, Length=290, Percent_Identity=31.7241379310345, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI217272877, Length=310, Percent_Identity=26.4516129032258, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI209862883, Length=316, Percent_Identity=27.5316455696203, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17534739, Length=351, Percent_Identity=32.1937321937322, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17508561, Length=304, Percent_Identity=32.8947368421053, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17561978, Length=314, Percent_Identity=31.2101910828025, Blast_Score=150, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17540334, Length=324, Percent_Identity=27.7777777777778, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17540332, Length=324, Percent_Identity=27.7777777777778, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193206283, Length=324, Percent_Identity=27.7777777777778, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI193209491, Length=217, Percent_Identity=31.3364055299539, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17537347, Length=262, Percent_Identity=29.0076335877863, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25154020, Length=325, Percent_Identity=23.6923076923077, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25154022, Length=325, Percent_Identity=23.3846153846154, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321244, Length=316, Percent_Identity=31.9620253164557, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323999, Length=314, Percent_Identity=31.8471337579618, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6324307, Length=335, Percent_Identity=29.2537313432836, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6325325, Length=254, Percent_Identity=27.5590551181102, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI24644244, Length=380, Percent_Identity=30.2631578947368, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI24657891, Length=314, Percent_Identity=30.8917197452229, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI24642144, Length=311, Percent_Identity=29.5819935691318, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24642146, Length=311, Percent_Identity=29.5819935691318, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI281360899, Length=311, Percent_Identity=29.5819935691318, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24642142, Length=311, Percent_Identity=29.5819935691318, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI281360799, Length=217, Percent_Identity=34.1013824884793, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI281360801, Length=217, Percent_Identity=34.1013824884793, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24641720, Length=217, Percent_Identity=34.1013824884793, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24649807, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003085 - InterPro: IPR000286 [H]
Pfam domain/function: PF00850 Hist_deacetyl [H]
EC number: NA
Molecular weight: Translated: 42133; Mature: 42133
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIYREEYRLYNFGPDHPFSPVRLEMLTSLLQALGVWRAPLSPPEASREEVLSVHSERLV CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KRVEAASRGELYPDLEHYLGTGDTPVFPGMDRAARILVGGTLEGARRIMAGEKRVLQLGG HHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHCEEEECCCHHHHHHHHHCCHHHHHHCC GLHHAQYDRASGFCVYNDLSVAIRHMTQVGLRVAYVDIDVHHGDGVQWIHYEEGEVLTLS CCCHHHCCCCCCCEEECHHHHHHHHHHHHCEEEEEEEEEEECCCCEEEEEECCCCEEEEE LHESGRYLFPGTGHVYEIGRGAGLGKKLNLPLEPFTEDESYLEVFEALVPWALKAFRPDV EECCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE LVVQAGADAHYLDPLADLLLTARAYERLFRLLLEYAEAYAGGRVLFTLGGGYSLDGTVRV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH WALLYHLFHGLPLPERLPEGWLRTWEARLGRPLTPTLHDPEGAYPEIPRREEIAKRNRLT HHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQRLTELVAPHLLH HHHHHHHHHHHHCC >Mature Secondary Structure MVIYREEYRLYNFGPDHPFSPVRLEMLTSLLQALGVWRAPLSPPEASREEVLSVHSERLV CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KRVEAASRGELYPDLEHYLGTGDTPVFPGMDRAARILVGGTLEGARRIMAGEKRVLQLGG HHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHCEEEECCCHHHHHHHHHCCHHHHHHCC GLHHAQYDRASGFCVYNDLSVAIRHMTQVGLRVAYVDIDVHHGDGVQWIHYEEGEVLTLS CCCHHHCCCCCCCEEECHHHHHHHHHHHHCEEEEEEEEEEECCCCEEEEEECCCCEEEEE LHESGRYLFPGTGHVYEIGRGAGLGKKLNLPLEPFTEDESYLEVFEALVPWALKAFRPDV EECCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE LVVQAGADAHYLDPLADLLLTARAYERLFRLLLEYAEAYAGGRVLFTLGGGYSLDGTVRV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH WALLYHLFHGLPLPERLPEGWLRTWEARLGRPLTPTLHDPEGAYPEIPRREEIAKRNRLT HHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQRLTELVAPHLLH HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934817; 9387221; 9384377 [H]