| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980433
Identifier: 55980433
GI number: 55980433
Start: 433112
End: 434122
Strand: Reverse
Name: 55980433
Synonym: TTHA0464
Alternate gene names: NA
Gene position: 434122-433112 (Counterclockwise)
Preceding gene: 55980434
Following gene: 55980415
Centisome position: 23.47
GC content: 70.92
Gene sequence:
>1011_bases GTGCGCCTGGCCCCCAGGGTTCTGGGTCTTTGGGTCGCCGCCCTGCTCCTCGGGGCCCTTCCCGTTCCCCCGGGCCCCCC TCCCTCGCCCAGCCTCCGGAGCCTCCTCCCCTACCCTCCGGAGAAGCGGGAGGCCCTGGTGGCCCGCCACCTCGCCAACA AGGCGAGCCTGCACCTCCTCTTCGGGGAGAAGGCGGCCCGGGCCTACGACCGCCTCCTCAGGCTGGAGCTCGCCAACCAA CAAAGCGGGAAGCGTTCGGCCTTCGCCACAGCGGAGGAAGCCCTAGAAGCGGCGCACCGTTTCCTCCTGGCCATCGGTCA GGCGGTCCGGAAAGCCCCGGTCAACCTGGAAGGGCTCCCCATGGCCCCCCGCCACGTCCTGCCCCACGCCCGGGAGATCC GGGCCGCGGCCCACGCCCTCGGCCTCCCCCCCGGGGTGCTGGCCGCCATCGTGGACAACGAGCAGCACGGCGGGGACAAG GCCTTGGGGCTCTCCCGGGGGGTGCGGGAGGTGGCGGACGGGGTGGCCCTCACCCTGGGGGAGGCCCCCTTTTCCCGCAC CCTGGGCCTGGCCCAGATGAGCTGGGAGGACGCCCTAAAACAGGAGGCGCGCCTAAGGCGCTTCGGCGCCTGGGACCCCC TAAGGCCCTTTCCCCACACCGAAGCCGAAGCCCGCAGGGCTCTCCTGGACCCCTACCTCAACCTCCTTTTCACCGCAAGC CGCCTGCGGGGCTATTTCAACGCCCTCCTCTCCCTCCCGCCGGAGGATACCCGGCCCCTAGAGGACCCGTGGCTCTACTA CCTGGGCCCTGCCTGGCACAACTACCCCTTGAGGGCCCAGAACCTGGAAACCTGGGACGACAGCTTCAACGGCTTCTTCA AGGGCCTCCTCTACCAGGCGGTCTTGGAGGGGTACTGGACCCTCCAGGGCCGCCGCCTCCTCCCCCTTAAACCCCTAGGC CCGGGAAGCCTCGAGGCCCCCTCCCCGCCGGTACCCCACCTCTTCCCCTAG
Upstream 100 bases:
>100_bases GCCGCCTACGCCAACCCCGCCCTCAAGGTGAACCCCGGCCACTCCTCGGAGAAGGCCGCCCCCGGGACCTAGAGGCGGCG CCCCCGTTCCGAAGCCCGCC
Downstream 100 bases:
>100_bases ATCCGCTCCATCCAGGGTAGGGGCTTTCCGGGGGGCAAGACGGGCCAGCGCCCCTCGCGCATGTGGCGGAAGACGGCCTC CACCGCCCGCTCCGCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRLAPRVLGLWVAALLLGALPVPPGPPPSPSLRSLLPYPPEKREALVARHLANKASLHLLFGEKAARAYDRLLRLELANQ QSGKRSAFATAEEALEAAHRFLLAIGQAVRKAPVNLEGLPMAPRHVLPHAREIRAAAHALGLPPGVLAAIVDNEQHGGDK ALGLSRGVREVADGVALTLGEAPFSRTLGLAQMSWEDALKQEARLRRFGAWDPLRPFPHTEAEARRALLDPYLNLLFTAS RLRGYFNALLSLPPEDTRPLEDPWLYYLGPAWHNYPLRAQNLETWDDSFNGFFKGLLYQAVLEGYWTLQGRRLLPLKPLG PGSLEAPSPPVPHLFP
Sequences:
>Translated_336_residues MRLAPRVLGLWVAALLLGALPVPPGPPPSPSLRSLLPYPPEKREALVARHLANKASLHLLFGEKAARAYDRLLRLELANQ QSGKRSAFATAEEALEAAHRFLLAIGQAVRKAPVNLEGLPMAPRHVLPHAREIRAAAHALGLPPGVLAAIVDNEQHGGDK ALGLSRGVREVADGVALTLGEAPFSRTLGLAQMSWEDALKQEARLRRFGAWDPLRPFPHTEAEARRALLDPYLNLLFTAS RLRGYFNALLSLPPEDTRPLEDPWLYYLGPAWHNYPLRAQNLETWDDSFNGFFKGLLYQAVLEGYWTLQGRRLLPLKPLG PGSLEAPSPPVPHLFP >Mature_336_residues MRLAPRVLGLWVAALLLGALPVPPGPPPSPSLRSLLPYPPEKREALVARHLANKASLHLLFGEKAARAYDRLLRLELANQ QSGKRSAFATAEEALEAAHRFLLAIGQAVRKAPVNLEGLPMAPRHVLPHAREIRAAAHALGLPPGVLAAIVDNEQHGGDK ALGLSRGVREVADGVALTLGEAPFSRTLGLAQMSWEDALKQEARLRRFGAWDPLRPFPHTEAEARRALLDPYLNLLFTAS RLRGYFNALLSLPPEDTRPLEDPWLYYLGPAWHNYPLRAQNLETWDDSFNGFFKGLLYQAVLEGYWTLQGRRLLPLKPLG PGSLEAPSPPVPHLFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37012; Mature: 37012
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAPRVLGLWVAALLLGALPVPPGPPPSPSLRSLLPYPPEKREALVARHLANKASLHLL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE FGEKAARAYDRLLRLELANQQSGKRSAFATAEEALEAAHRFLLAIGQAVRKAPVNLEGLP ECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MAPRHVLPHAREIRAAAHALGLPPGVLAAIVDNEQHGGDKALGLSRGVREVADGVALTLG CCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC EAPFSRTLGLAQMSWEDALKQEARLRRFGAWDPLRPFPHTEAEARRALLDPYLNLLFTAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLRGYFNALLSLPPEDTRPLEDPWLYYLGPAWHNYPLRAQNLETWDDSFNGFFKGLLYQA HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLEGYWTLQGRRLLPLKPLGPGSLEAPSPPVPHLFP HHHHHHEECCCEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLAPRVLGLWVAALLLGALPVPPGPPPSPSLRSLLPYPPEKREALVARHLANKASLHLL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE FGEKAARAYDRLLRLELANQQSGKRSAFATAEEALEAAHRFLLAIGQAVRKAPVNLEGLP ECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MAPRHVLPHAREIRAAAHALGLPPGVLAAIVDNEQHGGDKALGLSRGVREVADGVALTLG CCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC EAPFSRTLGLAQMSWEDALKQEARLRRFGAWDPLRPFPHTEAEARRALLDPYLNLLFTAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLRGYFNALLSLPPEDTRPLEDPWLYYLGPAWHNYPLRAQNLETWDDSFNGFFKGLLYQA HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLEGYWTLQGRRLLPLKPLGPGSLEAPSPPVPHLFP HHHHHHEECCCEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA