| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is aroA [H]
Identifier: 55980426
GI number: 55980426
Start: 428440
End: 429723
Strand: Direct
Name: aroA [H]
Synonym: TTHA0457
Alternate gene names: 55980426
Gene position: 428440-429723 (Clockwise)
Preceding gene: 55980425
Following gene: 55980427
Centisome position: 23.16
GC content: 73.52
Gene sequence:
>1284_bases ATGGACGCGTTCCGCCTCGCGCCTTGTGGTCCCTTGCGGGGGCGCCTCCGCGTCCCCGGGGACAAGTCCGTGACCCACCG CGGCCTCATGCTCCTCGCCCTGGCCGAGGGGGAGGGAAGGCTCTTCTACCCCTTGAAGGCGGGGGACACCCTCTCCACGG CCCGGGTCCTCCAGGCCCTCGGGGCCGAGGTCCGGGAGGAGGGGCCCCACTTCCTCGTGCGGGGAAGGGGCCTAAGGTTC CAGGAGCCCGAGGACGTCCTGGACTGCGGCAACGCCGGAACCCTCATGCGCCTCCTCCTCGGCCTCCTCGCGGGCCAGGA GGGGCTTTTCGCCGTCCTCACCGGGGACGCCTCCTTGAGGCGCCGCCCCATGGGCCGGGTGGTGGCCCCCTTGAGGGCCA TGGGGGCGAGGGTGGACGGGCGGGAGGAGGGGGAGAGGGCGCCCCTCGCCGTCCGGGGGGCGCCCCTGAGGGGTTTGCGC TACACCCTCCCCGTGCCCAGCGCCCAGGTGAAGAGCGCCCTCCTCCTCGCCGGCCTCTTCGCCGAGGGGGTGACGGAGGT GGAGGAGCCCACGCCCACCCGGGACCACACGGAGAGGCTCTTCCGCCACTTCGGCCTGCCCTTGGAGGTGGAGGGAAGGA AGGTGCGCACCTGGCGCACGGGGCCCTTTCCCGCCAAGGACCTCGTGGTGCCCGGGGACTTCTCCTCGGCCGCCTTCTTC CTGGTGGCGGCCCTCGTCACCCCGGGCTCGGAGGTGGTGGTGGAGGGGGTGGGGCTGAACCCCACCCGCACCGGCCTCCT CACCGTCCTCAAGGCCATGGGGGCGGACCTGGAGTGGCAGGTCCTCGAGGGCGAGGCGGGGGAGCCCGTGGGGTGGGTGC GGGCCCGGCATAGCCTCCTGAAGGGCGTGGCCGTGGACCCCGGCCTCATCCCCCTCATGGTGGACGAGGTGCCGGTCCTG GCGGCGGCCGCCGCCTGGGCGGAAGGGGAGACCTACATCCCGGGCCTCTCCGAGCTTCGGGTCAAGGAGTCCGACCGGGT CCGGGCCATCGCCGAAAACCTCCGGGCCCTCGGGGTGGAGGTGGAGGAAGGCCCGGACTGGCTCCGCATCCGGGGCGGGG GGGTGAGGCCGGGCCGGGTGCGGCCCTTCCACGACCACCGCATCGCCATGGCCTTCGCCGTGGCCGGGCTTCCCGTGGGG GTGGAGGTGGAGGAGCCCCACTGGGCCGAGATCTCCTACCCGGGTTTCTTCCAGGACCTCCTCAGGCTATGCGCGGCATC GTGA
Upstream 100 bases:
>100_bases CCACCGAGGAGGAGGTGGACCGGGCGGTGGCGGTCTTCCGGGAGGCCGTGGCCCGGGCCCGGGCTTGACCGGGCCCGAGC GGAACGGAAGACTAGGGGGG
Downstream 100 bases:
>100_bases CCATAGACGGGCCTTCGGCCTCCGGCAAGAGCTCCGTGGCCAGGCGGGTGGCGGCGGCCTTGGGCGTGCCCTACCTCTCC AGCGGCCTCCTCTACCGGGC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQALGAEVREEGPHFLVRGRGLRF QEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLRRRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLR YTLPVPSAQVKSALLLAGLFAEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFF LVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLLKGVAVDPGLIPLMVDEVPVL AAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVEVEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVG VEVEEPHWAEISYPGFFQDLLRLCAAS
Sequences:
>Translated_427_residues MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQALGAEVREEGPHFLVRGRGLRF QEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLRRRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLR YTLPVPSAQVKSALLLAGLFAEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFF LVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLLKGVAVDPGLIPLMVDEVPVL AAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVEVEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVG VEVEEPHWAEISYPGFFQDLLRLCAAS >Mature_427_residues MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQALGAEVREEGPHFLVRGRGLRF QEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLRRRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLR YTLPVPSAQVKSALLLAGLFAEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFF LVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLLKGVAVDPGLIPLMVDEVPVL AAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVEVEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVG VEVEEPHWAEISYPGFFQDLLRLCAAS
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=443, Percent_Identity=30.9255079006772, Blast_Score=147, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320332, Length=454, Percent_Identity=26.8722466960352, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 46029; Mature: 46029
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQAL CCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH GAEVREEGPHFLVRGRGLRFQEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLR HHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHH RRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLRYTLPVPSAQVKSALLLAGLF HCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHH AEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFF HHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCEEECCCCCHHHHH LVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLL HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH KGVAVDPGLIPLMVDEVPVLAAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVE HCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHCCE VEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVGVEVEEPHWAEISYPGFFQDL EECCCCEEEEECCCCCCCCCCCCCCCHHEEHHHHHCCCCCEEECCCCCEEECCCHHHHHH LRLCAAS HHHHCCC >Mature Secondary Structure MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQAL CCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH GAEVREEGPHFLVRGRGLRFQEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLR HHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHH RRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLRYTLPVPSAQVKSALLLAGLF HCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHH AEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFF HHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCEEECCCCCHHHHH LVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLL HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH KGVAVDPGLIPLMVDEVPVLAAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVE HCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHCCE VEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVGVEVEEPHWAEISYPGFFQDL EECCCCEEEEECCCCCCCCCCCCCCCHHEEHHHHHCCCCCEEECCCCCEEECCCHHHHHH LRLCAAS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA