| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is livK [C]
Identifier: 55980420
GI number: 55980420
Start: 423086
End: 424309
Strand: Direct
Name: livK [C]
Synonym: TTHA0451
Alternate gene names: 55980420
Gene position: 423086-424309 (Clockwise)
Preceding gene: 55980419
Following gene: 55980421
Centisome position: 22.87
GC content: 66.09
Gene sequence:
>1224_bases ATGGGGTTGGCGAAGGGAGGGAAGCGTATGCGAAGGACACTGGCAGGCATCGCGGCGGTCTTGGGGTTGGCTTTAGGCCA GCAGCAGGTGACCCTCTTCTGGTCGGGGGCCATCACCGGGCCCACCTCGGACGCGGGGGCCCCTTACGGGGCGGCGGTGG AGGACTACTGCAAGTGGGCCAACGAGCGGAAGCTCGTGCCCGGGGTGGTCTTCAACTGTGTGGTGCGGGACGACCAGTAC AACAACGCCAACACCCAGCGCTTCTTTGAGGAGGCGGTGGACCGCTTCAAGATCCCCGTCTTCCTCTCCTACGCCACGGG GGCGAACCTCCAGCTCAAGCCCCTGATCCAGGAGCTCAGGATCCCCACCATCCCCGCCTCCATGCACATTGAGCTCATTG ACCCGCCCAACAACGATTACATCTTCCTCCCCACCACCAGCTACTCCGAGCAGGTGGTGGCCCTTCTGGAGTACATCGCC CGCGAGAAGAAGGGGGCCAAGGTGGCCCTGGTGGTCCACCCCTCCCCCTTCGGCCGGGCTCCGGTGGAGGACGCGAGGAA GGCGGCCCGGGAGCTCGGGCTTCAGATCGTGGACGTCCAGGAGGTGGGAAGCGGCAACCTGGACAACACCGCCCTCCTCA AGCGCTTTGAGCAGGCCGGGGTGGAGTACGTGGTCCACCAGAACGTGGCGGGCCCCGTGGCCAACATCCTCAAGGACGCC AAGCGCCTGGGCCTGAAGATGCGCCACCTGGGGGCCCACTACACGGGGGGGCCGGACCTCATCGCCTTGGCCGGGGACGC GGCGGAGGGCTTCCTCTGGGCCACGAGCTTCTACATGGCCCACGAGGACACCCCGGGGATCCGGCTGCAGAAGGAGATCG GGCGGAAGTACGGCCGTCCCGAAAACTTCATTGAGAGCGTGAACTACACGAACGGGATGCTCGTCGCGTCCATCGCCGTG GAGGCCATCCGCAGGGCCCAGGAGCGGTTCAAGCGGATCACCAACGAGACCGTCTACCAGGCCATCGTCGGCATGAACGG GCCCAACGCCTTCAAGCCGGGCTTCGCCGTCTCCACCAAGCAGGGCGTGGAGATTGACTTCACCAAGAGCGAGCACACGG GGGCGGAAGGCCTCCGGATCCTCGAGGCCAAGGGAGGGCGCTTCGTCCCCGTCACGGAGCCCTTCACCTCGGCCCTCTTC CGCAAGGTGCACTACGGCAAGTAG
Upstream 100 bases:
>100_bases CCTCTTCCTGGTGTTTGAGCCCAGGGGGCTTTACAACTGGTGGCGCGTGATGCGAAGCTACTTCCGCACCTGGCCCTTTA GGTACTAGGCAACCCCCCTC
Downstream 100 bases:
>100_bases ACCCCGGGAGCCCGGGGTGCCCCGGGCCCCTTTCCCACAAGGCCATGGACGCTTTGAACCCGATCCGTCCCGAGGACCTC GGCCCCATCCTCCTCCTCGT
Product: branched chain amino acid ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MGLAKGGKRMRRTLAGIAAVLGLALGQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQY NNANTQRFFEEAVDRFKIPVFLSYATGANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIA REKKGAKVALVVHPSPFGRAPVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDA KRLGLKMRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMAHEDTPGIRLQKEIGRKYGRPENFIESVNYTNGMLVASIAV EAIRRAQERFKRITNETVYQAIVGMNGPNAFKPGFAVSTKQGVEIDFTKSEHTGAEGLRILEAKGGRFVPVTEPFTSALF RKVHYGK
Sequences:
>Translated_407_residues MGLAKGGKRMRRTLAGIAAVLGLALGQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQY NNANTQRFFEEAVDRFKIPVFLSYATGANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIA REKKGAKVALVVHPSPFGRAPVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDA KRLGLKMRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMAHEDTPGIRLQKEIGRKYGRPENFIESVNYTNGMLVASIAV EAIRRAQERFKRITNETVYQAIVGMNGPNAFKPGFAVSTKQGVEIDFTKSEHTGAEGLRILEAKGGRFVPVTEPFTSALF RKVHYGK >Mature_406_residues GLAKGGKRMRRTLAGIAAVLGLALGQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQYN NANTQRFFEEAVDRFKIPVFLSYATGANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAR EKKGAKVALVVHPSPFGRAPVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDAK RLGLKMRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMAHEDTPGIRLQKEIGRKYGRPENFIESVNYTNGMLVASIAVE AIRRAQERFKRITNETVYQAIVGMNGPNAFKPGFAVSTKQGVEIDFTKSEHTGAEGLRILEAKGGRFVPVTEPFTSALFR KVHYGK
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44576; Mature: 44444
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAKGGKRMRRTLAGIAAVLGLALGQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWA CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCCCHHHHHHHHC NERKLVPGVVFNCVVRDDQYNNANTQRFFEEAVDRFKIPVFLSYATGANLQLKPLIQELR CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCC IPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAREKKGAKVALVVHPSPFGRA CCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC PVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDA CHHHHHHHHHHHCCEEEEHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH KRLGLKMRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMAHEDTPGIRLQKEIGRKYGRP HHHCCHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCEEHHHHHHHCCCC ENFIESVNYTNGMLVASIAVEAIRRAQERFKRITNETVYQAIVGMNGPNAFKPGFAVSTK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC QGVEIDFTKSEHTGAEGLRILEAKGGRFVPVTEPFTSALFRKVHYGK CCCEEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure GLAKGGKRMRRTLAGIAAVLGLALGQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWA CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCCCHHHHHHHHC NERKLVPGVVFNCVVRDDQYNNANTQRFFEEAVDRFKIPVFLSYATGANLQLKPLIQELR CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCC IPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAREKKGAKVALVVHPSPFGRA CCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC PVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDA CHHHHHHHHHHHCCEEEEHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH KRLGLKMRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMAHEDTPGIRLQKEIGRKYGRP HHHCCHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCEEHHHHHHHCCCC ENFIESVNYTNGMLVASIAVEAIRRAQERFKRITNETVYQAIVGMNGPNAFKPGFAVSTK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC QGVEIDFTKSEHTGAEGLRILEAKGGRFVPVTEPFTSALFRKVHYGK CCCEEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA