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The map label for this gene is yidD [C]

Identifier: 55980413

GI number: 55980413

Start: 417522

End: 417770

Strand: Reverse

Name: yidD [C]

Synonym: TTHA0444

Alternate gene names: 55980413

Gene position: 417770-417522 (Counterclockwise)

Preceding gene: 55980414

Following gene: 55980412

Centisome position: 22.59

GC content: 70.28

Gene sequence:

>249_bases
GTGCGCGAGGTGCTGATCCTCCTCATCCGCTTCTACCGCCGTTTTCTCTCTCCCCTGAAACCCAGGACCTGTCGCTTCCA
CCCCACCTGCTCCGCCTACGCCCTCGAGGCCCTGGAGCGGCACGGGGCCTTCTGGGGGAGCTATCTCGCCGTGCGGCGGG
TCCTCCGCTGCCACCCCTGGAACCCCGGCGGGCTGGACCCGGTGCCCGTCCTCTTCCCCCCGGGGAAGGTCCGGGGAGGT
GCGGAATGA

Upstream 100 bases:

>100_bases
CTGGTGGTGGCGAGCCCCGAGGCCCGGGAGGCGGACTTCGCCGAGCTCTTCCGGGACGTGGTCAGGGCCTTGCGCAAGAG
CGGGTTGGTACAATAGCGGC

Downstream 100 bases:

>100_bases
AGAGGCTCCTTGCGGCCTTCCTCTTCCTCCTCCCCGCCCTCGCCCTGGAGGTGGGGTTCAAGGACGCGGACGTCAACGGG
GACGGGACCCCGGAAAAGGT

Product: alpha-hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MREVLILLIRFYRRFLSPLKPRTCRFHPTCSAYALEALERHGAFWGSYLAVRRVLRCHPWNPGGLDPVPVLFPPGKVRGG
AE

Sequences:

>Translated_82_residues
MREVLILLIRFYRRFLSPLKPRTCRFHPTCSAYALEALERHGAFWGSYLAVRRVLRCHPWNPGGLDPVPVLFPPGKVRGG
AE
>Mature_82_residues
MREVLILLIRFYRRFLSPLKPRTCRFHPTCSAYALEALERHGAFWGSYLAVRRVLRCHPWNPGGLDPVPVLFPPGKVRGG
AE

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=62.1212121212121, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y076_THET2 (Q72LI3)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_004051.1
- ProteinModelPortal:   Q72LI3
- STRING:   Q72LI3
- GeneID:   2775787
- GenomeReviews:   AE017221_GR
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   HPERYED
- ProtClustDB:   CLSK2558343
- BioCyc:   TTHE262724:TT_C0076-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9417; Mature: 9417

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVLILLIRFYRRFLSPLKPRTCRFHPTCSAYALEALERHGAFWGSYLAVRRVLRCHPW
CHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
NPGGLDPVPVLFPPGKVRGGAE
CCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MREVLILLIRFYRRFLSPLKPRTCRFHPTCSAYALEALERHGAFWGSYLAVRRVLRCHPW
CHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
NPGGLDPVPVLFPPGKVRGGAE
CCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA