| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980366
Identifier: 55980366
GI number: 55980366
Start: 376712
End: 377755
Strand: Reverse
Name: 55980366
Synonym: TTHA0397
Alternate gene names: NA
Gene position: 377755-376712 (Counterclockwise)
Preceding gene: 55980367
Following gene: 55980365
Centisome position: 20.42
GC content: 72.03
Gene sequence:
>1044_bases GTGAAGACCCTGGACCGCTACCTCCTGCGGGAAACCCTGCCCCTCTTCGGCGGCGGGCTCCTCGTCATCGTCCTCCTCTT CCTGGGCGGGGCGGTGTACGAGGTCCTGGCCCCCCTGGTGGCCAAGGGGGCCGACCCCTACACCCTCCTCCGCTACCTCC TCTTCCGCACCCCCGAGGCCCTGGCCCGGGGCGCGCCCGTGGCCTACCTCTTCGCCCTCCTCGTCCTCCTCTCCCGCCTG GGGGAGGACGCGGAACTCAAGGCCCTCCTGGCCCTCGGGGTGCGGCGGGAGCGCCTCCTCCTTCCCTTCCTCCTCCTCGG GACCGCCATCGCCCTCGCCGCCTTCCTCCTCGGGGAGGGCCTCGTCCCCCAAGCCCTCGCCAAGGGGCAGGACCTCCTGA GGCGGGAGGTCCTGGAGCGCCCCCGGGCCCTCCTCACCCCGGGGGCGACCTTCCAGGACGCCCAAGGCCGGGTGGTCTAC GTGGGGAAGGTGGAGGGGGAGGCCATCGGGGCCCTCAGGGTCCTCTCCCGGGAGGAGGTCCTCCTCGCCGAGCGGGGAAG CTTCCGCGGCGGGGTGCTGCACGTGGAGGAGGGGACCCGCATCACCTACGAGGGAAGCCGCCCCCGGACCCTGGCGCGCT TTCAGCGGGGGGAGCTCGTCCTCAAGGACCTCACCTTTGACCCCTGGCAGAACCCAGCGAACCGGATGACCCTGGCCGAG CTCCGAAAGGAGGTGCAAAGGCTCCGCCAGATGGGGGTGCGGGCGGGCCTCGAGGCCACCACCTACTACCGCCGCTTCGC CGAGCCCCTGGCCGCCCCCGTCTTCGCCCTCTTCGCCGTGGGCCTCGCCTTCTACCTCCTCGGGGGAAGCCGCAGCCTCG GGCTTGTGGGGGTGGCCGTCCTCACCTTCTTCTACTACGCCACCTGGAGCGTGGGGCGGATCATGGGGGAGCAGAACGCC CTGGACCCCTTCCTCGCCGCCTTCGGCCCCAACCTCCTCTACGGGGCCTTGGGCCTTTTCCTCTTCCTGGGAGGGCGGCG GTGA
Upstream 100 bases:
>100_bases TGGCCGCCCAGCTCGCCCGCTACGACGTAAGCCCCCTCCTCGCCTACCTCCCCGACCTCTTCTACGGGGCCTTGGCGGGG GCGCTCGCCTGGAGGCTACG
Downstream 100 bases:
>100_bases GGTGGCTTCCCCTTCTCCTCTTCCTCCTCCTTCCCGCCCTCGCAGAGGAGAGGGTGATCAAGGTCCTGGAGGCGGAAAGG CTGGAGCTTAGGCAGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Family Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEALARGAPVAYLFALLVLLSRL GEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEGLVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVY VGKVEGEAIGALRVLSREEVLLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPANRMTLAE LRKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGSRSLGLVGVAVLTFFYYATWSVGRIMGEQNA LDPFLAAFGPNLLYGALGLFLFLGGRR
Sequences:
>Translated_347_residues MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEALARGAPVAYLFALLVLLSRL GEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEGLVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVY VGKVEGEAIGALRVLSREEVLLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPANRMTLAE LRKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGSRSLGLVGVAVLTFFYYATWSVGRIMGEQNA LDPFLAAFGPNLLYGALGLFLFLGGRR >Mature_347_residues MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEALARGAPVAYLFALLVLLSRL GEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEGLVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVY VGKVEGEAIGALRVLSREEVLLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPANRMTLAE LRKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGSRSLGLVGVAVLTFFYYATWSVGRIMGEQNA LDPFLAAFGPNLLYGALGLFLFLGGRR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38079; Mature: 38079
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREEV CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH LLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPANRMTLAE HHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LRKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGSRSLGLVGVAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR HHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREEV CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH LLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPANRMTLAE HHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LRKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGSRSLGLVGVAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR HHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA