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The map label for this gene is ucpA [H]

Identifier: 55980363

GI number: 55980363

Start: 372567

End: 373250

Strand: Reverse

Name: ucpA [H]

Synonym: TTHA0394

Alternate gene names: 55980363

Gene position: 373250-372567 (Counterclockwise)

Preceding gene: 55980364

Following gene: 55980350

Centisome position: 20.18

GC content: 70.91

Gene sequence:

>684_bases
ATGCTCCAAGGGAAGGCCTTTCTCATCACCGGGGCCGGAGGGGCCCTAAGCCGGGCCCTCATCCCCGCCTTCCACCAGGC
GGGGGCCAGGCTCTTCCTCTCCGACCCCAGGCCCGAGCGCATGGCGGAACGGGCCCAGGCCGTGGGGGCCAAGACCTTCG
TCGCCGACCTCACCCGGCTGGAGGAAGCCCTGGCCCTGGCCCGGTTCGTGGAGGAGGAGGCCCCCCTCTACGGGGTGGTC
CACACCGTGGGCGGCTTCGCCGCCGGGCGGTTTTTGGACACCGACCCGGGGCTTTACGACTGGATGCTGGACCTGAACCT
CCGCACCACCTTCAACCTCCTCAAGGCCGTCCTGCCTTACATGGCCAAGCGGGGGGAGGGCTTCTTCGCCGCCTTCGCCG
CCGGCCCCGCCTGGACGGGGGCGGGCCCGGGAAGGGCCCTCTACACCGCGGCCAAAACCGCCCTGGCGAGCCTCTTGAGG
TCCTTGCAGGGGGAGGTGGAGGGGGTGCGCTTCCTCGTGGTCTACCCCATGGGCACCCTGGACACGGAGGCCAACCGCAA
GGCCATGCCCGAGGCGGACTTCTCCCGCTGGATCGCCCCCGAGCTCGTGGCCAAGGTGGTGGTGGAGGCGGCGGGGGCTA
AGGGCGGGAGGCTTCTGGAGCTTCCCATCTACCCGCCCCTCTAG

Upstream 100 bases:

>100_bases
TACGTCTACGACCTCGTCCCCTCCCCGCCCCAAAGGGTGGCCATCCTCTCCTTGGGCCTCGCCCCCAAGGCCCTGGCCTT
CCTCCCCGTAGAATAGGGGC

Downstream 100 bases:

>100_bases
CCCCCACGTAGGCCCCGAGGAAGTCCGCCACGAGGTCCAGGCCGAAGGCCTCCCGCCCCGGGACGAGGCTCTGGTGCCAT
TCGTCCACCACCCCGTAGAG

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLQGKAFLITGAGGALSRALIPAFHQAGARLFLSDPRPERMAERAQAVGAKTFVADLTRLEEALALARFVEEEAPLYGVV
HTVGGFAAGRFLDTDPGLYDWMLDLNLRTTFNLLKAVLPYMAKRGEGFFAAFAAGPAWTGAGPGRALYTAAKTALASLLR
SLQGEVEGVRFLVVYPMGTLDTEANRKAMPEADFSRWIAPELVAKVVVEAAGAKGGRLLELPIYPPL

Sequences:

>Translated_227_residues
MLQGKAFLITGAGGALSRALIPAFHQAGARLFLSDPRPERMAERAQAVGAKTFVADLTRLEEALALARFVEEEAPLYGVV
HTVGGFAAGRFLDTDPGLYDWMLDLNLRTTFNLLKAVLPYMAKRGEGFFAAFAAGPAWTGAGPGRALYTAAKTALASLLR
SLQGEVEGVRFLVVYPMGTLDTEANRKAMPEADFSRWIAPELVAKVVVEAAGAKGGRLLELPIYPPL
>Mature_227_residues
MLQGKAFLITGAGGALSRALIPAFHQAGARLFLSDPRPERMAERAQAVGAKTFVADLTRLEEALALARFVEEEAPLYGVV
HTVGGFAAGRFLDTDPGLYDWMLDLNLRTTFNLLKAVLPYMAKRGEGFFAAFAAGPAWTGAGPGRALYTAAKTALASLLR
SLQGEVEGVRFLVVYPMGTLDTEANRKAMPEADFSRWIAPELVAKVVVEAAGAKGGRLLELPIYPPL

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=184, Percent_Identity=27.7173913043478, Blast_Score=71, Evalue=7e-13,
Organism=Escherichia coli, GI87082100, Length=229, Percent_Identity=31.0043668122271, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24307; Mature: 24307

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGKAFLITGAGGALSRALIPAFHQAGARLFLSDPRPERMAERAQAVGAKTFVADLTRL
CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EEALALARFVEEEAPLYGVVHTVGGFAAGRFLDTDPGLYDWMLDLNLRTTFNLLKAVLPY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHEEECCHHHHHHHHHHHHHH
MAKRGEGFFAAFAAGPAWTGAGPGRALYTAAKTALASLLRSLQGEVEGVRFLVVYPMGTL
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
DTEANRKAMPEADFSRWIAPELVAKVVVEAAGAKGGRLLELPIYPPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MLQGKAFLITGAGGALSRALIPAFHQAGARLFLSDPRPERMAERAQAVGAKTFVADLTRL
CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EEALALARFVEEEAPLYGVVHTVGGFAAGRFLDTDPGLYDWMLDLNLRTTFNLLKAVLPY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHEEECCHHHHHHHHHHHHHH
MAKRGEGFFAAFAAGPAWTGAGPGRALYTAAKTALASLLRSLQGEVEGVRFLVVYPMGTL
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
DTEANRKAMPEADFSRWIAPELVAKVVVEAAGAKGGRLLELPIYPPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]