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The map label for this gene is yraN [C]

Identifier: 55980341

GI number: 55980341

Start: 354878

End: 355216

Strand: Direct

Name: yraN [C]

Synonym: TTHA0372

Alternate gene names: 55980341

Gene position: 354878-355216 (Clockwise)

Preceding gene: 55980340

Following gene: 55980342

Centisome position: 19.19

GC content: 66.96

Gene sequence:

>339_bases
GTGGGCGCCTTGAGGGGAAGGTGGGCCGAGGAGGAGGCCCTTCGCTTCCTCCTGGGGAAGGGCTACCGCCTCCTTTGGAG
GAACCGCCGCACTCCCTTCGGCGAGGTGGACCTCTTCATGGAAAAGGACGGGGTTTACGTGGTGGTGGAGGTGAAGCAGC
GGGCTTCCGCCCGCTTCGGCGCTCCCCTGGAGGCCATTACCCCGGGGAAGGTGAGGAGGCTTCTCCAAAGCGCCCGCTTC
CTCCTCGGACGGGACGACCTCCCGGTGCGCCTCGAGGCCGTCCTCGTCCACGGCACCCCAAAGGACTTCCGCCTGGAGCA
CCTTGTGCTGGAGCTCTAA

Upstream 100 bases:

>100_bases
ACGAGGGGCCGGGGGAGGAGGGCCTGAGGCTTTCGGGGACCTACCAGGTCCTGGGGGAGGCCCGCTTCCGCCTCTATTTG
GACGGGGAGCTTTTCCAGGA

Downstream 100 bases:

>100_bases
GGGTAAGCTTAGGGGTGTTTCGGAACCTTCGGGCCTACCTCGAGGCCTTGGAACGCCGGGGGGAGCTCCACCGGGTCAGG
GTCCCGGTGAGCGCTGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MGALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVEVKQRASARFGAPLEAITPGKVRRLLQSARF
LLGRDDLPVRLEAVLVHGTPKDFRLEHLVLEL

Sequences:

>Translated_112_residues
MGALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVEVKQRASARFGAPLEAITPGKVRRLLQSARF
LLGRDDLPVRLEAVLVHGTPKDFRLEHLVLEL
>Mature_111_residues
GALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVEVKQRASARFGAPLEAITPGKVRRLLQSARFL
LGRDDLPVRLEAVLVHGTPKDFRLEHLVLEL

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 12884; Mature: 12753

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVEVKQRASARFG
CCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCC
APLEAITPGKVRRLLQSARFLLGRDDLPVRLEAVLVHGTPKDFRLEHLVLEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHEEEEEC
>Mature Secondary Structure 
GALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVEVKQRASARFG
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCC
APLEAITPGKVRRLLQSARFLLGRDDLPVRLEAVLVHGTPKDFRLEHLVLEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA