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The map label for this gene is 55980325

Identifier: 55980325

GI number: 55980325

Start: 337226

End: 338515

Strand: Reverse

Name: 55980325

Synonym: TTHA0356

Alternate gene names: NA

Gene position: 338515-337226 (Counterclockwise)

Preceding gene: 55980326

Following gene: 55980324

Centisome position: 18.3

GC content: 68.68

Gene sequence:

>1290_bases
ATGCAAAGGCGGACCTTTTTGAAGAAGCTCGGCGTAGGCGTGGCGGCAAGCCTCGTTCTGGGCCCCGCCCTGGTGCGGGC
GCAGTCCGGCCCCGTGATCCGCGTGGCCGGGGACTCCACCGCCGTGGGCGAGGGCGGCCGCTGGATGAAGGAGATGGTGG
AGGCCTGGGGGAAGAAGACGGGCACCCGGGTGGAGTACATTGACTCCCCCGCCGACACCAACGACCGCCTCGCCCTCTAC
CAGCAGTACTGGGCCGCCAGGAGCCCCGATGTGGACGTCTACATGATTGACGTCATCTGGCCGGGCATCGTGGCGCCCCA
CGCCCTGGACCTGAAGCCCTACCTCACGGAGGCGGAGCTCAAGGAGTTCTTCCCCCGTATCGTCCAGAACAACACCATCC
GGGGCAAGCTCACCTCCCTGCCCTTCTTCACCGACGCCGGCATCCTTTACTACCGCAAGGACCTCCTGGAGAAGTACGGC
TATACGAGCCCGCCCCGGACCTGGAACGAGCTGGAGCAGATGGCCGAGCGGGTCATGGAAGGGGAGAGGCGGGCGGGCAA
CCGCGACTTCTGGGGGTTCGTCTTCCAGGGTAAGCCCTACGAGGGCCTCACCTGCGACGCCCTGGAGTGGATCTACTCCC
ACGGGGGCGGGCGCATCGTGGAGCCCGACGGCACCATCAGCGTCAACAACGGCCGGGCGGCCCTGGCCCTGAACCGGGCC
CACGGCTGGGTGGGGAGGATCGCCCCCCAGGGCGTGACCAGCTACGCCGAGGAGGAGGCGAGGAACGTCTGGCAGCAGGG
CAACAGCCTCTTCATGCGCAACTGGCCCTACGCCTACGCCTTGGGCCAGGCGGAGGGGAGCCCCATCCGGGGCAAGTTCG
GGGTCACGGTCCTGCCCAAGGCCTCGGCGGACGCCCCCAACGCCGCCACCCTGGGCGGCTGGCAGCTCATGGTCTCCGCC
TACAGCCGCTACCCCAAGGAGGCCGTGGACCTGGTCAAGTACCTGGCCTCCTACGAGGTCCAGAAGGACAACGCCGTCCG
CCTCTCCCGCCTGCCCACCCGGCCCGCCCTTTACACCGACCGGGACGTCTTGGCGAGGAACCCCTGGTTTAGGGACCTCC
TCCCCGTCTTCCAGAACGCCGTCTCCCGTCCCTCCGACGTGGCCGGGGCCCGGTACAACCAGGTGTCCGAGGCCATCTGG
ACCGAGGTGCACAGCGTCCTCACGGGCAGGAAGAAGGGCGAGCAGGCCGTGCGGGACCTCGAGGCCCGCATCCGCCGCAT
CCTGCGCTAG

Upstream 100 bases:

>100_bases
CCTCCTGACCTTTGCAAGGCAAGCCCACCCCTCCCCCCTTGACGCTCCCCCAAAAGCCCCCTTATAATCGCTGTGGAATA
GCTTCCAAAGGAGGTACGGT

Downstream 100 bases:

>100_bases
CCCCATGCCTTCCCGGGGAGGCCTGGGCCTCCCCGGGTTCACCCCAAGGCCATGCTCACCCTAAGACAGGTCCGTTTAGC
CTGGATCCTGGTCCTGCCCA

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MQRRTFLKKLGVGVAASLVLGPALVRAQSGPVIRVAGDSTAVGEGGRWMKEMVEAWGKKTGTRVEYIDSPADTNDRLALY
QQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAELKEFFPRIVQNNTIRGKLTSLPFFTDAGILYYRKDLLEKYG
YTSPPRTWNELEQMAERVMEGERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVNNGRAALALNRA
HGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAYALGQAEGSPIRGKFGVTVLPKASADAPNAATLGGWQLMVSA
YSRYPKEAVDLVKYLASYEVQKDNAVRLSRLPTRPALYTDRDVLARNPWFRDLLPVFQNAVSRPSDVAGARYNQVSEAIW
TEVHSVLTGRKKGEQAVRDLEARIRRILR

Sequences:

>Translated_429_residues
MQRRTFLKKLGVGVAASLVLGPALVRAQSGPVIRVAGDSTAVGEGGRWMKEMVEAWGKKTGTRVEYIDSPADTNDRLALY
QQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAELKEFFPRIVQNNTIRGKLTSLPFFTDAGILYYRKDLLEKYG
YTSPPRTWNELEQMAERVMEGERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVNNGRAALALNRA
HGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAYALGQAEGSPIRGKFGVTVLPKASADAPNAATLGGWQLMVSA
YSRYPKEAVDLVKYLASYEVQKDNAVRLSRLPTRPALYTDRDVLARNPWFRDLLPVFQNAVSRPSDVAGARYNQVSEAIW
TEVHSVLTGRKKGEQAVRDLEARIRRILR
>Mature_429_residues
MQRRTFLKKLGVGVAASLVLGPALVRAQSGPVIRVAGDSTAVGEGGRWMKEMVEAWGKKTGTRVEYIDSPADTNDRLALY
QQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAELKEFFPRIVQNNTIRGKLTSLPFFTDAGILYYRKDLLEKYG
YTSPPRTWNELEQMAERVMEGERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVNNGRAALALNRA
HGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAYALGQAEGSPIRGKFGVTVLPKASADAPNAATLGGWQLMVSA
YSRYPKEAVDLVKYLASYEVQKDNAVRLSRLPTRPALYTDRDVLARNPWFRDLLPVFQNAVSRPSDVAGARYNQVSEAIW
TEVHSVLTGRKKGEQAVRDLEARIRRILR

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48119; Mature: 48119

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRTFLKKLGVGVAASLVLGPALVRAQSGPVIRVAGDSTAVGEGGRWMKEMVEAWGKKT
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC
GTRVEYIDSPADTNDRLALYQQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAEL
CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCHHHH
KEFFPRIVQNNTIRGKLTSLPFFTDAGILYYRKDLLEKYGYTSPPRTWNELEQMAERVME
HHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVNNGRAALALNRA
HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCEEEECCCCEEEEEECC
HGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAYALGQAEGSPIRGKFGVTVLPK
CCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEECC
ASADAPNAATLGGWQLMVSAYSRYPKEAVDLVKYLASYEVQKDNAVRLSRLPTRPALYTD
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCCCCC
RDVLARNPWFRDLLPVFQNAVSRPSDVAGARYNQVSEAIWTEVHSVLTGRKKGEQAVRDL
CHHHHCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EARIRRILR
HHHHHHHCC
>Mature Secondary Structure
MQRRTFLKKLGVGVAASLVLGPALVRAQSGPVIRVAGDSTAVGEGGRWMKEMVEAWGKKT
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC
GTRVEYIDSPADTNDRLALYQQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAEL
CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCHHHH
KEFFPRIVQNNTIRGKLTSLPFFTDAGILYYRKDLLEKYGYTSPPRTWNELEQMAERVME
HHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVNNGRAALALNRA
HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCEEEECCCCEEEEEECC
HGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAYALGQAEGSPIRGKFGVTVLPK
CCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEECC
ASADAPNAATLGGWQLMVSAYSRYPKEAVDLVKYLASYEVQKDNAVRLSRLPTRPALYTD
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCCCCC
RDVLARNPWFRDLLPVFQNAVSRPSDVAGARYNQVSEAIWTEVHSVLTGRKKGEQAVRDL
CHHHHCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EARIRRILR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]