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The map label for this gene is ycjP [H]

Identifier: 55980323

GI number: 55980323

Start: 335460

End: 336302

Strand: Reverse

Name: ycjP [H]

Synonym: TTHA0354

Alternate gene names: 55980323

Gene position: 336302-335460 (Counterclockwise)

Preceding gene: 55980324

Following gene: 55980320

Centisome position: 18.18

GC content: 65.84

Gene sequence:

>843_bases
GTGAGGCGTGCAAGCCGCCTTCTGGGAAGGCTCTTCTTCTACCTCCTCGTGGTCTTCGTGGTCGTCTACAGCGTTTTTCC
CTTCTACTGGGCGGTGATCTCCAGCTTCAAGCCCTCGGACGCCCTCTTCTCCCCCGACCCCAGCTTCCTCCCCGTGCCCT
TCACCCTGGAGCACTACGAGAACGTTTTCCTTCAGGCCAACTTCGGCCGCAACCTCCTCAACTCCCTCATCGTGGCCGGG
GGGGCCACCCTCCTCTCCTTGGTCCTCGGCGTCCTCGCCGCCTACGCCTTGGGGAGGCTTCCCTTCCCGCCCAAAAACGC
CGTGATGTACATCGTCCTCTCCATGACCATGTTCCCCCAGATCGCGGTCCTGGGCGGCCTCTTCCTCCTCCTGCGCCAGA
CGGGGCTTTTCAACACCCACCTCGGCCTCATCCTCACCTACCTCCTCTTCACCCTGCCCTTCACGGTCTGGGTGCTGGTG
GGCTACTTCCGCGGGCTTCCTAGGGAGCTGGAGGAGGCGGCCTACGTGGACGGGGCGACGCCCCTCCAGACCCTCCTCAA
GGTGATGCTCCCCCTCACGGGGCCCGGCCTCGTCACCACGGGCCTCCTCGCCTTCATCGCCGCCTGGAACGAGTACCTCT
TCGCCCTCACCTTCACCGTGGGGGACTCGGTGAAGACCGTGCCCCCCGCCATCGCCAGCTTCGGCGGGGCCACGCCCTTT
GAGATCCCTTGGGGCTCCATCATGGCGGCGAGCGTGGTGGTCACGGTGCCCCTGGTGGTCCTCGTCCTCGTCTTCCAGCA
AAGGATTGTCGCCGGCCTCACCGCGGGGGCGGTGAAGGGCTAG

Upstream 100 bases:

>100_bases
AGGACTTGGGTTACGGCTCCGCCATCAGCGTGGCCATCCTCGTGATCATCTTCGCCTTCGTTCTCCTCTACATGCGCACC
GTCGGGAAGGAGGCGTTGAA

Downstream 100 bases:

>100_bases
GGGCCCGAAAGCCGGGGTTCAGGCGAGGGCCTTGTGGAGGAGGGCGGTGGCTTCCTCCAGGACCCTTTCCAGGTGGGCTT
CCCCGAGGAAGCTTTCCGCG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRRASRLLGRLFFYLLVVFVVVYSVFPFYWAVISSFKPSDALFSPDPSFLPVPFTLEHYENVFLQANFGRNLLNSLIVAG
GATLLSLVLGVLAAYALGRLPFPPKNAVMYIVLSMTMFPQIAVLGGLFLLLRQTGLFNTHLGLILTYLLFTLPFTVWVLV
GYFRGLPRELEEAAYVDGATPLQTLLKVMLPLTGPGLVTTGLLAFIAAWNEYLFALTFTVGDSVKTVPPAIASFGGATPF
EIPWGSIMAASVVVTVPLVVLVLVFQQRIVAGLTAGAVKG

Sequences:

>Translated_280_residues
MRRASRLLGRLFFYLLVVFVVVYSVFPFYWAVISSFKPSDALFSPDPSFLPVPFTLEHYENVFLQANFGRNLLNSLIVAG
GATLLSLVLGVLAAYALGRLPFPPKNAVMYIVLSMTMFPQIAVLGGLFLLLRQTGLFNTHLGLILTYLLFTLPFTVWVLV
GYFRGLPRELEEAAYVDGATPLQTLLKVMLPLTGPGLVTTGLLAFIAAWNEYLFALTFTVGDSVKTVPPAIASFGGATPF
EIPWGSIMAASVVVTVPLVVLVLVFQQRIVAGLTAGAVKG
>Mature_280_residues
MRRASRLLGRLFFYLLVVFVVVYSVFPFYWAVISSFKPSDALFSPDPSFLPVPFTLEHYENVFLQANFGRNLLNSLIVAG
GATLLSLVLGVLAAYALGRLPFPPKNAVMYIVLSMTMFPQIAVLGGLFLLLRQTGLFNTHLGLILTYLLFTLPFTVWVLV
GYFRGLPRELEEAAYVDGATPLQTLLKVMLPLTGPGLVTTGLLAFIAAWNEYLFALTFTVGDSVKTVPPAIASFGGATPF
EIPWGSIMAASVVVTVPLVVLVLVFQQRIVAGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=35.4609929078014, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=36.7441860465116, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789860, Length=280, Percent_Identity=27.5, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30413; Mature: 30413

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASRLLGRLFFYLLVVFVVVYSVFPFYWAVISSFKPSDALFSPDPSFLPVPFTLEHYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
NVFLQANFGRNLLNSLIVAGGATLLSLVLGVLAAYALGRLPFPPKNAVMYIVLSMTMFPQ
CCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IAVLGGLFLLLRQTGLFNTHLGLILTYLLFTLPFTVWVLVGYFRGLPRELEEAAYVDGAT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
PLQTLLKVMLPLTGPGLVTTGLLAFIAAWNEYLFALTFTVGDSVKTVPPAIASFGGATPF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCCC
EIPWGSIMAASVVVTVPLVVLVLVFQQRIVAGLTAGAVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRASRLLGRLFFYLLVVFVVVYSVFPFYWAVISSFKPSDALFSPDPSFLPVPFTLEHYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
NVFLQANFGRNLLNSLIVAGGATLLSLVLGVLAAYALGRLPFPPKNAVMYIVLSMTMFPQ
CCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IAVLGGLFLLLRQTGLFNTHLGLILTYLLFTLPFTVWVLVGYFRGLPRELEEAAYVDGAT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
PLQTLLKVMLPLTGPGLVTTGLLAFIAAWNEYLFALTFTVGDSVKTVPPAIASFGGATPF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCCC
EIPWGSIMAASVVVTVPLVVLVLVFQQRIVAGLTAGAVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]