| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is prsA [H]
Identifier: 55980321
GI number: 55980321
Start: 331985
End: 333811
Strand: Direct
Name: prsA [H]
Synonym: TTHA0352
Alternate gene names: 55980321
Gene position: 331985-333811 (Clockwise)
Preceding gene: 55980317
Following gene: 55980322
Centisome position: 17.95
GC content: 67.49
Gene sequence:
>1827_bases GTGTTCGGTCTCAGCAAACGCGCCATCACCATCCTCTTCGGCCTTCTGGCCCTGGCCTTCGCCCTGGGGGCCATCCTCCT CTTCACCCCCCAGGCGGCGCAGCAGACCCGGGGCAAGCCGGTCCTTTGGGTGAACGGCAAGGCCCTCTACGAGCTGGACC TCCTCCGGCTCCAAGGAAACGACCCCCTCTACGCCGCAAGCCCCGAGGGCCTGCTCAAGACCTTGGTGGACACCTACTTC CTGGAGCAGGTCATCCTCACCGAGGCCCTGAAGCAGGACGCCGCCCGGGTGCGGGTCTCCAGCGCCGAGGTGCGCCAGGA GGTGAACCGCATCCGGGAGCAGTTCGGCCTAAAGGACAAGGCGGCCTACGAGCAGTTCCTCAACCAGGTGGGTTACACGG ACGCCCAGCTTAGGGCCGAGGTCAAGACCCAGCTCCAGATCCAGAAGCGTCTGGAGCAGATCCGCTCGGGCGCTAAGCCC ACCGAGGAGGAGGTGCGGTTCTACTACGAGGTCTTCAAGGAGAACTACAGGACCGAGCCCCGGGTGAAGGCCCGCCAGAT CGTGGTGGACGACAAGGCCCTCGCCGAGGAGCTCGCCGCCAAGGCCAAGGCCGGGGAGGACTTCGCCGCCCTGGCCCGCC AGCACTCCAAGGTGGGGGCGGAGCAGGGGGGCGCTTTGGGGGCGGGCCCCGGGGAGGCGGAGCCCAAGCCCGTGACCCAG GTGGTCTTCCCCACGGAGGTGGGGGAAGCGGTCTTCGCCCTGAAGGGGCCGGGCGTGGTGGGGCCCATCGCCGCAGGAGG CCGGTACTACATCGTGAAGGTGGAGGAATACCTCCCCTCTACCCTCCCCGCCTTTGAGGAGGTCAAGGACCGGGTGGCCC AGGACGCAGAGAGGGCCAAGGGGAACGGCGTCCTCGAGGCCTACCTGGAAGAGCTCCGCAAGAAGGCCCAGGTCCGCTTC GCCGAGGACAACCCCTACGCCTACCAGAACCCGCCCGTGGCCAAGGTCAACGAGAAGGAGATCCTCCTCAGCGAGGTGCT CCAGCCCGTCTTCTCCAACCAGCAGACGGTGGCCCTGGTCCAGCAGGGCCTGGGGGAGCTCGCCGTCCAGTTCTTCCTTC CCCAGACCCTGGAGAACCTCATTGACCGGGAGCTCCTGGTGGAGGCGGCCCGAAAAAGCGGCAAGCCCTTCATCGGCTCC AAGGCGGAGATCGCCGAGGCCTACCTCCGCTACGAGACCCGGGACGTGACGGCGAGCGAGGAGGAGGCCCGGGCCTTCTA CAGCGAGAACCCCGCCCTCTTCACCGTGCCCGCGAGCGCCAAGGTGATCGGGGTGAACTTCAAGGAGGAAGCCCAGGCCA AGGCCTTCCGGGCCGCGGCCCTTAGGGGCGGGGACCTCGAGGCCCTGGCCAAGGCCCAAGAAGGCACGGTCACCGACTAC GGCACCGTGAACCCCAACCAGCTCCCCGCCGTCCTGGACCGCCTGGTCTTCAAGATCACCGAGACCTTCCCCCAAGGCCC CTTGGGGGAGGTGAGCGAGGTGATCAAGATGGAAGACGGCTCCTACACCGTCCTCCTCATCTCCGACCGCAAGGCGGAGG AGCTGAAGGGCTTCGCCCAGGTGGCCGAGGAGGCCCGGCAGGGAGCGGTCAACCGGAAGCGGAGCGAAAAGGCCCAGGCC CTGATCCAGGCCCTGCGCGAGGAGGCGAAAATCGAGAACCGGCTGGCCGAGGTGCTGCAGGCCCTCACCCCCAAAACCCC CTCCCAGGACCAACCCAACTCCCAGGAACAACCCCAGCCTGAAGAGGCCCCGGCCAACAACCCCTAA
Upstream 100 bases:
>100_bases GAACCTCTGACCTTCGGCTCCGGAGGCCGACGCTCTATCCAGCTGAGCTACGGGCGCATACAGCAAGAGCTACTTTAGCA CCCGCAAAGGAGGCAGTCAA
Downstream 100 bases:
>100_bases CCCTGGGGCCCGGAGAGAAGGGGCGGGGGCTTCCCCGCCCTTTTACAATGGCCCCATGGAGATCACCCGGCTCCTCACCC TCTACTACGAGGCGACCCCA
Product: peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MFGLSKRAITILFGLLALAFALGAILLFTPQAAQQTRGKPVLWVNGKALYELDLLRLQGNDPLYAASPEGLLKTLVDTYF LEQVILTEALKQDAARVRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLRAEVKTQLQIQKRLEQIRSGAKP TEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEELAAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQ VVFPTEVGEAVFALKGPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAKGNGVLEAYLEELRKKAQVRF AEDNPYAYQNPPVAKVNEKEILLSEVLQPVFSNQQTVALVQQGLGELAVQFFLPQTLENLIDRELLVEAARKSGKPFIGS KAEIAEAYLRYETRDVTASEEEARAFYSENPALFTVPASAKVIGVNFKEEAQAKAFRAAALRGGDLEALAKAQEGTVTDY GTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMEDGSYTVLLISDRKAEELKGFAQVAEEARQGAVNRKRSEKAQA LIQALREEAKIENRLAEVLQALTPKTPSQDQPNSQEQPQPEEAPANNP
Sequences:
>Translated_608_residues MFGLSKRAITILFGLLALAFALGAILLFTPQAAQQTRGKPVLWVNGKALYELDLLRLQGNDPLYAASPEGLLKTLVDTYF LEQVILTEALKQDAARVRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLRAEVKTQLQIQKRLEQIRSGAKP TEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEELAAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQ VVFPTEVGEAVFALKGPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAKGNGVLEAYLEELRKKAQVRF AEDNPYAYQNPPVAKVNEKEILLSEVLQPVFSNQQTVALVQQGLGELAVQFFLPQTLENLIDRELLVEAARKSGKPFIGS KAEIAEAYLRYETRDVTASEEEARAFYSENPALFTVPASAKVIGVNFKEEAQAKAFRAAALRGGDLEALAKAQEGTVTDY GTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMEDGSYTVLLISDRKAEELKGFAQVAEEARQGAVNRKRSEKAQA LIQALREEAKIENRLAEVLQALTPKTPSQDQPNSQEQPQPEEAPANNP >Mature_608_residues MFGLSKRAITILFGLLALAFALGAILLFTPQAAQQTRGKPVLWVNGKALYELDLLRLQGNDPLYAASPEGLLKTLVDTYF LEQVILTEALKQDAARVRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLRAEVKTQLQIQKRLEQIRSGAKP TEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEELAAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQ VVFPTEVGEAVFALKGPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAKGNGVLEAYLEELRKKAQVRF AEDNPYAYQNPPVAKVNEKEILLSEVLQPVFSNQQTVALVQQGLGELAVQFFLPQTLENLIDRELLVEAARKSGKPFIGS KAEIAEAYLRYETRDVTASEEEARAFYSENPALFTVPASAKVIGVNFKEEAQAKAFRAAALRGGDLEALAKAQEGTVTDY GTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMEDGSYTVLLISDRKAEELKGFAQVAEEARQGAVNRKRSEKAQA LIQALREEAKIENRLAEVLQALTPKTPSQDQPNSQEQPQPEEAPANNP
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF05698 Trigger_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 66912; Mature: 66912
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLSKRAITILFGLLALAFALGAILLFTPQAAQQTRGKPVLWVNGKALYELDLLRLQGN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCEEEEEEEEEECCC DPLYAASPEGLLKTLVDTYFLEQVILTEALKQDAARVRVSSAEVRQEVNRIREQFGLKDK CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AAYEQFLNQVGYTDAQLRAEVKTQLQIQKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC RVKARQIVVDDKALAEELAAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQ CHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCEE VVFPTEVGEAVFALKGPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAK EECCHHHCCEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHC GNGVLEAYLEELRKKAQVRFAEDNPYAYQNPPVAKVNEKEILLSEVLQPVFSNQQTVALV CCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH QQGLGELAVQFFLPQTLENLIDRELLVEAARKSGKPFIGSKAEIAEAYLRYETRDVTASE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCH EEARAFYSENPALFTVPASAKVIGVNFKEEAQAKAFRAAALRGGDLEALAKAQEGTVTDY HHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC GTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMEDGSYTVLLISDRKAEELKGFAQ CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHH VAEEARQGAVNRKRSEKAQALIQALREEAKIENRLAEVLQALTPKTPSQDQPNSQEQPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EEAPANNP CCCCCCCC >Mature Secondary Structure MFGLSKRAITILFGLLALAFALGAILLFTPQAAQQTRGKPVLWVNGKALYELDLLRLQGN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCEEEEEEEEEECCC DPLYAASPEGLLKTLVDTYFLEQVILTEALKQDAARVRVSSAEVRQEVNRIREQFGLKDK CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AAYEQFLNQVGYTDAQLRAEVKTQLQIQKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC RVKARQIVVDDKALAEELAAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQ CHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCEE VVFPTEVGEAVFALKGPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAK EECCHHHCCEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHC GNGVLEAYLEELRKKAQVRFAEDNPYAYQNPPVAKVNEKEILLSEVLQPVFSNQQTVALV CCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH QQGLGELAVQFFLPQTLENLIDRELLVEAARKSGKPFIGSKAEIAEAYLRYETRDVTASE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCH EEARAFYSENPALFTVPASAKVIGVNFKEEAQAKAFRAAALRGGDLEALAKAQEGTVTDY HHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC GTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMEDGSYTVLLISDRKAEELKGFAQ CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHH VAEEARQGAVNRKRSEKAQALIQALREEAKIENRLAEVLQALTPKTPSQDQPNSQEQPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EEAPANNP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA