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The map label for this gene is ybhK [C]

Identifier: 55980287

GI number: 55980287

Start: 306631

End: 307857

Strand: Reverse

Name: ybhK [C]

Synonym: TTHA0318

Alternate gene names: 55980287

Gene position: 307857-306631 (Counterclockwise)

Preceding gene: 55980288

Following gene: 55980286

Centisome position: 16.64

GC content: 74.08

Gene sequence:

>1227_bases
ATGTGGAGCGGGAAGGGTAGGGGCGTGTGGGCCCACCCGGCGTGGCGCTGGCTCCACCCCGGGATGCGGGTCAAGCGCTA
CGCCGCCCTGGCGGGCCTCGGGGTGGGTATGGCGGCCTGGGGGCTGGGCCAGGCCCTCCCCTTGCCCGCCCTGCCGCCCC
TCGCCGCCTGGGGGGTCGCCGCCCTGGGTGGGGGGCTTCTGGTCCTCGGGGTGCGGGCCATGAACCGGAGCATGCTTTCC
GCCTTCACCCGGCCCGAGGAGGTGCCGGAACGGGTCTACGTCCGAAGGCGGCTGGAGCGGGGGCCTAGGGTCGTGGCCTT
CGGGGGGGGGACGGGGCTTTCCCGGGCCCTTTCCGGCCTCAAGGAGGGGACGGCCAACCTCACCGCCGTGGTGGCGGTCA
CGGACGACGGGGGCTCCACGGGGCGGCTCAGGCTCGCCTACGGCCTCCCGGCGGTGGGGGACCTGGTGGACTGCCTGGCC
GCCCTCTCCGACCACCCCGCCCTTCCCCGCCTCCTTGCCTACCGTTTCCACCGGGGGGAGTTTTCCGGCCACACCTTCGG
CAACCTCTTCCTCGTCACCCTGTACGAGGCGAGCGGGGACTTCGCCGAGGCGGTGCGCCAGGCCAACGCCATCCTGAACC
TTCGGGGCCAGGTCCTGCCCGCCACGCCCCAGGCGGTGCGCCTCGCCGCCCGCCTCCAGGACGGGCGGAGGGTGGTGGGG
GAGGTGGCCTTGAGGGAGGCCGGGGGCCGGGTACGGGAGGTGGGGCTGGAGCCTGAGCCCAGCGTGGTCATGGGGGAGGT
CCTCGAGGCCCTCCGCCGGGCGGACCTCGTCCTTCTGGGGCCTGGGAGCCTCTACACCAGCGTCATCCCCAGCTTCCTCC
CCGGGCCCATCCGCGAGGCGGTGCGGCGGTCGGGGGCCCTTGTGGTCTACGTGGTCAACCTCATGACCGAGCCCGGGGAG
ACGGACGGGTACACCGCCTACGACCACTACAAGGCCGTGGCCCACCACCTGGGGCGGAGGCCGGACGTGGTGGTGGTCCA
CACCGCCCCCATCCCCGAGCCGGTGCTCCGGCGCTACGCCGCCGAGGGGCGCCACCCCGTGGCCTACGACCCCCGTCCCT
TCAGGGTGGACGGGGTGCGGGTGCTGGAGGGGGACTTCCGCGAGGCGGGGGAGCTTGCCCAGCACGACCCCAAGAAGCTG
GCGCGGGCGGTGCTGAAGCTGGTATAA

Upstream 100 bases:

>100_bases
GCCGTGGGCTGCACCGGGGGAAGGCACCGGAGCGTGGCCGTGGCGGAGCGCCTGGCGGAGGAGCTTTCCGGCAGGTTCGC
CGTGGAGGTGGTGCACCGGG

Downstream 100 bases:

>100_bases
AGGGGCCCGTGCTGTTCCTCTTTCAAGACCCCCTCGGGGACGCCCACGGCCTCGCCTACCTCTATCCCCAGGCCGCCCTT
TACCGGGAGGCCGGGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MWSGKGRGVWAHPAWRWLHPGMRVKRYAALAGLGVGMAAWGLGQALPLPALPPLAAWGVAALGGGLLVLGVRAMNRSMLS
AFTRPEEVPERVYVRRRLERGPRVVAFGGGTGLSRALSGLKEGTANLTAVVAVTDDGGSTGRLRLAYGLPAVGDLVDCLA
ALSDHPALPRLLAYRFHRGEFSGHTFGNLFLVTLYEASGDFAEAVRQANAILNLRGQVLPATPQAVRLAARLQDGRRVVG
EVALREAGGRVREVGLEPEPSVVMGEVLEALRRADLVLLGPGSLYTSVIPSFLPGPIREAVRRSGALVVYVVNLMTEPGE
TDGYTAYDHYKAVAHHLGRRPDVVVVHTAPIPEPVLRRYAAEGRHPVAYDPRPFRVDGVRVLEGDFREAGELAQHDPKKL
ARAVLKLV

Sequences:

>Translated_408_residues
MWSGKGRGVWAHPAWRWLHPGMRVKRYAALAGLGVGMAAWGLGQALPLPALPPLAAWGVAALGGGLLVLGVRAMNRSMLS
AFTRPEEVPERVYVRRRLERGPRVVAFGGGTGLSRALSGLKEGTANLTAVVAVTDDGGSTGRLRLAYGLPAVGDLVDCLA
ALSDHPALPRLLAYRFHRGEFSGHTFGNLFLVTLYEASGDFAEAVRQANAILNLRGQVLPATPQAVRLAARLQDGRRVVG
EVALREAGGRVREVGLEPEPSVVMGEVLEALRRADLVLLGPGSLYTSVIPSFLPGPIREAVRRSGALVVYVVNLMTEPGE
TDGYTAYDHYKAVAHHLGRRPDVVVVHTAPIPEPVLRRYAAEGRHPVAYDPRPFRVDGVRVLEGDFREAGELAQHDPKKL
ARAVLKLV
>Mature_408_residues
MWSGKGRGVWAHPAWRWLHPGMRVKRYAALAGLGVGMAAWGLGQALPLPALPPLAAWGVAALGGGLLVLGVRAMNRSMLS
AFTRPEEVPERVYVRRRLERGPRVVAFGGGTGLSRALSGLKEGTANLTAVVAVTDDGGSTGRLRLAYGLPAVGDLVDCLA
ALSDHPALPRLLAYRFHRGEFSGHTFGNLFLVTLYEASGDFAEAVRQANAILNLRGQVLPATPQAVRLAARLQDGRRVVG
EVALREAGGRVREVGLEPEPSVVMGEVLEALRRADLVLLGPGSLYTSVIPSFLPGPIREAVRRSGALVVYVVNLMTEPGE
TDGYTAYDHYKAVAHHLGRRPDVVVVHTAPIPEPVLRRYAAEGRHPVAYDPRPFRVDGVRVLEGDFREAGELAQHDPKKL
ARAVLKLV

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=222, Percent_Identity=39.1891891891892, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 43853; Mature: 43853

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSGKGRGVWAHPAWRWLHPGMRVKRYAALAGLGVGMAAWGLGQALPLPALPPLAAWGVA
CCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHH
ALGGGLLVLGVRAMNRSMLSAFTRPEEVPERVYVRRRLERGPRVVAFGGGTGLSRALSGL
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
KEGTANLTAVVAVTDDGGSTGRLRLAYGLPAVGDLVDCLAALSDHPALPRLLAYRFHRGE
HCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
FSGHTFGNLFLVTLYEASGDFAEAVRQANAILNLRGQVLPATPQAVRLAARLQDGRRVVG
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
EVALREAGGRVREVGLEPEPSVVMGEVLEALRRADLVLLGPGSLYTSVIPSFLPGPIREA
HHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCHHHHHH
VRRSGALVVYVVNLMTEPGETDGYTAYDHYKAVAHHLGRRPDVVVVHTAPIPEPVLRRYA
HHHCCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
AEGRHPVAYDPRPFRVDGVRVLEGDFREAGELAQHDPKKLARAVLKLV
HCCCCCCCCCCCCEEECCEEEECCCHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MWSGKGRGVWAHPAWRWLHPGMRVKRYAALAGLGVGMAAWGLGQALPLPALPPLAAWGVA
CCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHH
ALGGGLLVLGVRAMNRSMLSAFTRPEEVPERVYVRRRLERGPRVVAFGGGTGLSRALSGL
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
KEGTANLTAVVAVTDDGGSTGRLRLAYGLPAVGDLVDCLAALSDHPALPRLLAYRFHRGE
HCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
FSGHTFGNLFLVTLYEASGDFAEAVRQANAILNLRGQVLPATPQAVRLAARLQDGRRVVG
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
EVALREAGGRVREVGLEPEPSVVMGEVLEALRRADLVLLGPGSLYTSVIPSFLPGPIREA
HHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCHHHHHH
VRRSGALVVYVVNLMTEPGETDGYTAYDHYKAVAHHLGRRPDVVVVHTAPIPEPVLRRYA
HHHCCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
AEGRHPVAYDPRPFRVDGVRVLEGDFREAGELAQHDPKKLARAVLKLV
HCCCCCCCCCCCCEEECCEEEECCCHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]