| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980283
Identifier: 55980283
GI number: 55980283
Start: 303317
End: 304537
Strand: Reverse
Name: 55980283
Synonym: TTHA0314
Alternate gene names: NA
Gene position: 304537-303317 (Counterclockwise)
Preceding gene: 55980286
Following gene: 55980278
Centisome position: 16.46
GC content: 70.84
Gene sequence:
>1221_bases ATGTGGAGGGGACCGAGGGAGGGCAGGAGGATCATCCTTAGCATTTTAGGCGGGCTTCGCGGGAACCGGGGCCGGATCCT CCTCAACGGCTGGCTGATCTGGCTCGGGGACACGCTGATGAACCCCAACATCATCCTGGCGAGCTTCGCCGCCCGCCTCG GGGCCTCCCCGGTCCTCATCGGCCTCGTCCCCGCCCTTCCCCTGGCGGGGGGCCTGCTCCCTCAGGCCCTTTTGGTGGGG TGGGTGGCGCGCCACGGGCGGAAGCTTCCCCTCTACCGCAGGGCCTCGGCCTTCCGCTTCGCGGGGCTTTTGCTTCTCGT CTTTGGGGCCTTCTTCCTTGGGGCGTGGCCGGGCCTGCTTCTCGGCGTTTTCCTGGCGGGGCTTTTTCTTTTCGCCCTCT TCACCGCCGTGGCCAGCCTGCCCTACTGGGAGGTGTTGGCCAAGGCCGTGCCCCGCGAGGAGCGGCCCGGGCTCTTCGCC GCGATCTACATGGGAGGCGGGGTTTTGGCCTTTCTGGCCGGCTTCGGCGTGCGGGCCCTTCTGGGCCTGGACCTTCCCTT TCCCCTGGGCTACGCCCTCCTCTTCGCCCTGGGGACCCTGGCCTACGGGGCGGCGTGGTACGTCTTCGGGCGGGTGGAGG AGCCCGAGGAGGAGGTGGCGGTGGGGCGCACCGACCTCCGCCTTCCCCTGAGGCGCCCCGGGTTTCGCGCCTACCTCACG GCCCGGCTCTTCCTGGGGCTTGCGGGCATGGTGGAGCCCTTCTACGCCGCCTACGCGGTCCGGGTCTTGGGGAAGGAGGC GGAGCTCGGCCTCTACCTCGCCCTCAACGCCCTGGCCTTCATCCTCTCCAACGCCCTCTGGTCCGCCCTGGCCCGGAGGG GGGCGAAGGCCGTCTTTCTCGGAGGGGGGGTGCTGGTGCTCGCCACGCCCCTCCTCGCCCTCGCCCTTCCCCCCGGGGCC TTCGCCTTGGTCTTCTTCCTGCAGGGGGCCTACCTTGCCGCCTTGGGCATCGCCGGCAACACCTACCTCCTCAACCTGGC CCCGCCCGAGGAGCGGACCGCCACCGTGGGCCTCGCCAACAGCTTCCTGGGCCTCTTCGCCTTCTCCCCGGTCCTCGGAG GGTGGGTGGTGGGGGCTTGGGGCTACGGGGCGCTCTTCCTCCTCTCCGCGGGCCTGGCCGTCCTGGGCCTCTGGGCGGTC CGGCGGCTTCCGGAGGTGTGA
Upstream 100 bases:
>100_bases GGCGAGGGAGGCCTCGGAGTGGGAGGCCAGGTAGACCACGGGGGGGTTGGCCGCCTCGAGGATGGCCAGGACCGTGGCGG CGTTGTAGCGTGGGTGGAGT
Downstream 100 bases:
>100_bases TCCCACCCCATGCCGGCTTGCGCCAGCATGGGGGCCCCGGTAAAGGGTTCTCAAGGGGCTAGCCGAGCGAAGAATGCAGG GAGAAAGGGTGGGGTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MWRGPREGRRIILSILGGLRGNRGRILLNGWLIWLGDTLMNPNIILASFAARLGASPVLIGLVPALPLAGGLLPQALLVG WVARHGRKLPLYRRASAFRFAGLLLLVFGAFFLGAWPGLLLGVFLAGLFLFALFTAVASLPYWEVLAKAVPREERPGLFA AIYMGGGVLAFLAGFGVRALLGLDLPFPLGYALLFALGTLAYGAAWYVFGRVEEPEEEVAVGRTDLRLPLRRPGFRAYLT ARLFLGLAGMVEPFYAAYAVRVLGKEAELGLYLALNALAFILSNALWSALARRGAKAVFLGGGVLVLATPLLALALPPGA FALVFFLQGAYLAALGIAGNTYLLNLAPPEERTATVGLANSFLGLFAFSPVLGGWVVGAWGYGALFLLSAGLAVLGLWAV RRLPEV
Sequences:
>Translated_406_residues MWRGPREGRRIILSILGGLRGNRGRILLNGWLIWLGDTLMNPNIILASFAARLGASPVLIGLVPALPLAGGLLPQALLVG WVARHGRKLPLYRRASAFRFAGLLLLVFGAFFLGAWPGLLLGVFLAGLFLFALFTAVASLPYWEVLAKAVPREERPGLFA AIYMGGGVLAFLAGFGVRALLGLDLPFPLGYALLFALGTLAYGAAWYVFGRVEEPEEEVAVGRTDLRLPLRRPGFRAYLT ARLFLGLAGMVEPFYAAYAVRVLGKEAELGLYLALNALAFILSNALWSALARRGAKAVFLGGGVLVLATPLLALALPPGA FALVFFLQGAYLAALGIAGNTYLLNLAPPEERTATVGLANSFLGLFAFSPVLGGWVVGAWGYGALFLLSAGLAVLGLWAV RRLPEV >Mature_406_residues MWRGPREGRRIILSILGGLRGNRGRILLNGWLIWLGDTLMNPNIILASFAARLGASPVLIGLVPALPLAGGLLPQALLVG WVARHGRKLPLYRRASAFRFAGLLLLVFGAFFLGAWPGLLLGVFLAGLFLFALFTAVASLPYWEVLAKAVPREERPGLFA AIYMGGGVLAFLAGFGVRALLGLDLPFPLGYALLFALGTLAYGAAWYVFGRVEEPEEEVAVGRTDLRLPLRRPGFRAYLT ARLFLGLAGMVEPFYAAYAVRVLGKEAELGLYLALNALAFILSNALWSALARRGAKAVFLGGGVLVLATPLLALALPPGA FALVFFLQGAYLAALGIAGNTYLLNLAPPEERTATVGLANSFLGLFAFSPVLGGWVVGAWGYGALFLLSAGLAVLGLWAV RRLPEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43213; Mature: 43213
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRGPREGRRIILSILGGLRGNRGRILLNGWLIWLGDTLMNPNIILASFAARLGASPVLI CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHCCCCHHHHHHHHHHCCCCHHH GLVPALPLAGGLLPQALLVGWVARHGRKLPLYRRASAFRFAGLLLLVFGAFFLGAWPGLL HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFLAGLFLFALFTAVASLPYWEVLAKAVPREERPGLFAAIYMGGGVLAFLAGFGVRAL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH LGLDLPFPLGYALLFALGTLAYGAAWYVFGRVEEPEEEVAVGRTDLRLPLRRPGFRAYLT HCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH ARLFLGLAGMVEPFYAAYAVRVLGKEAELGLYLALNALAFILSNALWSALARRGAKAVFL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GGGVLVLATPLLALALPPGAFALVFFLQGAYLAALGIAGNTYLLNLAPPEERTATVGLAN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH SFLGLFAFSPVLGGWVVGAWGYGALFLLSAGLAVLGLWAVRRLPEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWRGPREGRRIILSILGGLRGNRGRILLNGWLIWLGDTLMNPNIILASFAARLGASPVLI CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHCCCCHHHHHHHHHHCCCCHHH GLVPALPLAGGLLPQALLVGWVARHGRKLPLYRRASAFRFAGLLLLVFGAFFLGAWPGLL HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFLAGLFLFALFTAVASLPYWEVLAKAVPREERPGLFAAIYMGGGVLAFLAGFGVRAL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH LGLDLPFPLGYALLFALGTLAYGAAWYVFGRVEEPEEEVAVGRTDLRLPLRRPGFRAYLT HCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH ARLFLGLAGMVEPFYAAYAVRVLGKEAELGLYLALNALAFILSNALWSALARRGAKAVFL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GGGVLVLATPLLALALPPGAFALVFFLQGAYLAALGIAGNTYLLNLAPPEERTATVGLAN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH SFLGLFAFSPVLGGWVVGAWGYGALFLLSAGLAVLGLWAVRRLPEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA