| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980272
Identifier: 55980272
GI number: 55980272
Start: 290320
End: 290829
Strand: Reverse
Name: 55980272
Synonym: TTHA0303
Alternate gene names: NA
Gene position: 290829-290320 (Counterclockwise)
Preceding gene: 55980278
Following gene: 55980270
Centisome position: 15.72
GC content: 70.39
Gene sequence:
>510_bases ATGGTCCGGTTGGAAGACTACGGCACCTGGGACGAGGCCCTAAAGCGGCTCGAGGCGAGCCGCAAGGCCCTCCTCGCCCT GCTTCGGGAGGCGGACCCCGCTTGGCTTTCCGCCCCCTTGCGGGAGGGGGCCTGGACCCCCCTCATGGTGGCGGAGCACG TCGCCTTGGTGGAGGACTCCACCGCCCGGGTCCTGAGGCGCTTGAGGCGCCTTGCGGCCGGGGAGAACCTTCCCCCTGTT CCCGTGAAGCCCGGGGAGTTCAAGGACGGCAAGCCCCAGGCCCCCGAGGGGGTGCGGCCCAAAGGGGGCCTTTCCCTGGA GGAGGTCCTGGCCCTTCTGGACAGGGCCCGGGCCTTCCTCCTGGAGGAGGTGGCCAAGGCGGATCCCCAAAACCCCGCCA CCTTCCCCCACCCCTTCTTCGGGGAGCTGAACCCCTTGGGCTGGCTTAGGGCCGCCGCCTACCACGAGGCCCACCACCTT AAGGCCCTTCAGGCCTCCTTGCCCCGGTAG
Upstream 100 bases:
>100_bases ACTTCCAAAGCCCAGGGCCGGGCTGAGGCGAGCCACGGGCCCCGGCTTTGGGCCTCGCTCCGTATTGGCGGAGGCTTTCT CGGCTAGTTTATAGTGAGGT
Downstream 100 bases:
>100_bases CGGGCGAGCCAGGCGTGGAGGCTCGCCGGGGAAACCCCCCGGATCACCTCCGTGCCCCCTTCCCACTCCAAGACCACCCC GGCGGTGGGGCTTCCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVRLEDYGTWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDSTARVLRRLRRLAAGENLPPV PVKPGEFKDGKPQAPEGVRPKGGLSLEEVLALLDRARAFLLEEVAKADPQNPATFPHPFFGELNPLGWLRAAAYHEAHHL KALQASLPR
Sequences:
>Translated_169_residues MVRLEDYGTWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDSTARVLRRLRRLAAGENLPPV PVKPGEFKDGKPQAPEGVRPKGGLSLEEVLALLDRARAFLLEEVAKADPQNPATFPHPFFGELNPLGWLRAAAYHEAHHL KALQASLPR >Mature_169_residues MVRLEDYGTWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDSTARVLRRLRRLAAGENLPPV PVKPGEFKDGKPQAPEGVRPKGGLSLEEVLALLDRARAFLLEEVAKADPQNPATFPHPFFGELNPLGWLRAAAYHEAHHL KALQASLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18712; Mature: 18712
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLEDYGTWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC TARVLRRLRRLAAGENLPPVPVKPGEFKDGKPQAPEGVRPKGGLSLEEVLALLDRARAFL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LEEVAKADPQNPATFPHPFFGELNPLGWLRAAAYHEAHHLKALQASLPR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRLEDYGTWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC TARVLRRLRRLAAGENLPPVPVKPGEFKDGKPQAPEGVRPKGGLSLEEVLALLDRARAFL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LEEVAKADPQNPATFPHPFFGELNPLGWLRAAAYHEAHHLKALQASLPR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA