| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yqhQ [H]
Identifier: 55980226
GI number: 55980226
Start: 244543
End: 245433
Strand: Direct
Name: yqhQ [H]
Synonym: TTHA0257
Alternate gene names: 55980226
Gene position: 244543-245433 (Clockwise)
Preceding gene: 55980224
Following gene: 55980227
Centisome position: 13.22
GC content: 69.7
Gene sequence:
>891_bases ATGGGAGGGATGCGGTGGCTTCTTCTAGCGAAGCAACCGGCCCTCGGGGGGGCGGCGGCCCTCGAGGGGGTGATGATGAA GGCCCCCTGGGCCTGGGCCCTGGCGGTGCGCCTGCCGGACGGAAGGATCCACGTGGAACGCCACGAGGAAAGGGCCCTCA CCGAGCGCTACCCCTGGACGAGGCTTCCCCTCCTCCGGGGGGTGGTGGCCCTCTTTGACGCCCTTTCCGTGAGCTACCGA GCCCTGGCGCGGAGCGCCGAGCTCGCCGGGGGCGAGGAGGTTCCCCGGGGGGCGCTTTGGGGGACGGTGGCGGTGAGTCT CCTCGTCGGGATCGCCCTTTTCATCGTCTTCCCCGGCTTTCTCGCCGGGCTTTTCGTGGACGCCGCCCGCCACCCCGCGC TCTACAACCTCCTCGCGGGCCTCCTCAAGGTGGGGATCTTGGTGGGCTACCTCCTCTTCATCCGGCGCATGCCGGAGATC CGCCGCTTCTTCATGTACCACGGGGCGGAGCACAAGGCCATCCACGCCTACGAGAAGGGGCTTCCCCTCACCGTGGAGAA CGTCCTGGCCCAGCCCCGCTTCCACCCCCGGTGCGGCACCACCTTCATCGCCTTCGTCATCGTGGTCTCGGTCCTGGTCT ACAGCCTCATCCCCGCCCCCGAGGTCCTCTGGTGGCGGCTCCTCGCCCGGGTGCTCTTCCTGCCCCTGGTGGCGGCCTTG GCCTATGAGCTCCTCTACTTCTCCGCCCGGCACCAGGACCCCTTCTCCCGCCTCCTCCGGGAGCTCGGCTTCCGCTTCCA GGCCCTCACCGTGGCCGAGCCCACCCCGGAGATGGTGGAGGTGGCCATCAGGAGCACCGAGGCGGCCCTAGGGGAGAGGG TGGTGGCATGA
Upstream 100 bases:
>100_bases GGCCCAGACCACCTTGAGGGGGGCCTGGCCCTCGGCCAGGCCCGTGGAAACGGCGCGCAGGGTGACCACGTCCAAGGTTT TACCACGGGGGCGTGGCAGA
Downstream 100 bases:
>100_bases AGCGGGTTCTCGTGGCCATGTCCGGGGGGGTGGACTCCTCCGTGGCCGCCCTCCTCCTCAAGGAGGCGGGCTACGAGGTG GTGGGGGCCATGATGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MGGMRWLLLAKQPALGGAAALEGVMMKAPWAWALAVRLPDGRIHVERHEERALTERYPWTRLPLLRGVVALFDALSVSYR ALARSAELAGGEEVPRGALWGTVAVSLLVGIALFIVFPGFLAGLFVDAARHPALYNLLAGLLKVGILVGYLLFIRRMPEI RRFFMYHGAEHKAIHAYEKGLPLTVENVLAQPRFHPRCGTTFIAFVIVVSVLVYSLIPAPEVLWWRLLARVLFLPLVAAL AYELLYFSARHQDPFSRLLRELGFRFQALTVAEPTPEMVEVAIRSTEAALGERVVA
Sequences:
>Translated_296_residues MGGMRWLLLAKQPALGGAAALEGVMMKAPWAWALAVRLPDGRIHVERHEERALTERYPWTRLPLLRGVVALFDALSVSYR ALARSAELAGGEEVPRGALWGTVAVSLLVGIALFIVFPGFLAGLFVDAARHPALYNLLAGLLKVGILVGYLLFIRRMPEI RRFFMYHGAEHKAIHAYEKGLPLTVENVLAQPRFHPRCGTTFIAFVIVVSVLVYSLIPAPEVLWWRLLARVLFLPLVAAL AYELLYFSARHQDPFSRLLRELGFRFQALTVAEPTPEMVEVAIRSTEAALGERVVA >Mature_295_residues GGMRWLLLAKQPALGGAAALEGVMMKAPWAWALAVRLPDGRIHVERHEERALTERYPWTRLPLLRGVVALFDALSVSYRA LARSAELAGGEEVPRGALWGTVAVSLLVGIALFIVFPGFLAGLFVDAARHPALYNLLAGLLKVGILVGYLLFIRRMPEIR RFFMYHGAEHKAIHAYEKGLPLTVENVLAQPRFHPRCGTTFIAFVIVVSVLVYSLIPAPEVLWWRLLARVLFLPLVAALA YELLYFSARHQDPFSRLLRELGFRFQALTVAEPTPEMVEVAIRSTEAALGERVVA
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 32912; Mature: 32780
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGMRWLLLAKQPALGGAAALEGVMMKAPWAWALAVRLPDGRIHVERHEERALTERYPWT CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCH RLPLLRGVVALFDALSVSYRALARSAELAGGEEVPRGALWGTVAVSLLVGIALFIVFPGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGLFVDAARHPALYNLLAGLLKVGILVGYLLFIRRMPEIRRFFMYHGAEHKAIHAYEKG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCC LPLTVENVLAQPRFHPRCGTTFIAFVIVVSVLVYSLIPAPEVLWWRLLARVLFLPLVAAL CCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AYELLYFSARHQDPFSRLLRELGFRFQALTVAEPTPEMVEVAIRSTEAALGERVVA HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GGMRWLLLAKQPALGGAAALEGVMMKAPWAWALAVRLPDGRIHVERHEERALTERYPWT CCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCH RLPLLRGVVALFDALSVSYRALARSAELAGGEEVPRGALWGTVAVSLLVGIALFIVFPGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGLFVDAARHPALYNLLAGLLKVGILVGYLLFIRRMPEIRRFFMYHGAEHKAIHAYEKG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCC LPLTVENVLAQPRFHPRCGTTFIAFVIVVSVLVYSLIPAPEVLWWRLLARVLFLPLVAAL CCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AYELLYFSARHQDPFSRLLRELGFRFQALTVAEPTPEMVEVAIRSTEAALGERVVA HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]