| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980222
Identifier: 55980222
GI number: 55980222
Start: 241947
End: 242204
Strand: Reverse
Name: 55980222
Synonym: TTHA0253
Alternate gene names: NA
Gene position: 242204-241947 (Counterclockwise)
Preceding gene: 55980223
Following gene: 55980220
Centisome position: 13.09
GC content: 71.32
Gene sequence:
>258_bases ATGATGGGCGATCCTAGGGAGCTTTTCTGGGAAGACGAGGGGCTCACCGAGGGCCTCACCGACGAGGAGGCCCAGTTCCT CTTGGGCTGGCTCATGGACGTGGCCGAGGACCTGGACCCGGCCCACCTGGCCCACCTCCGCCGCCTCGGGCGGGAGATCA CGCGGCTCGCCCGGGACTACGGGGTCCCCGTGGGGGAGCTCGTCCAGCTGGTGGAGCTGGCCTGGTCGGACCCGGAGCCC GAGGGGCTCCAGGCGTGA
Upstream 100 bases:
>100_bases TTAAGGAGGAGGTGCGGGCCGCCCGCGACCCCGCTTACCTCGAGGCCCTCCTCCGCCGGATGGGCTGGGTGCGGAAAGAC GAGGAGGTCCGCCGCTGGCC
Downstream 100 bases:
>100_bases CCTACACCGGCACGCCCTCCCCGAAGCGCGCCAGGCTCACCTCCTGCCCGCGGAGGGCGAGGAGCTTGCCTAGGGCGAGG AGCTTTTCCTCTTCCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP EGLQA
Sequences:
>Translated_85_residues MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP EGLQA >Mature_85_residues MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP EGLQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9630; Mature: 9630
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDY CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GVPVGELVQLVELAWSDPEPEGLQA CCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDY CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GVPVGELVQLVELAWSDPEPEGLQA CCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA