Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980222

Identifier: 55980222

GI number: 55980222

Start: 241947

End: 242204

Strand: Reverse

Name: 55980222

Synonym: TTHA0253

Alternate gene names: NA

Gene position: 242204-241947 (Counterclockwise)

Preceding gene: 55980223

Following gene: 55980220

Centisome position: 13.09

GC content: 71.32

Gene sequence:

>258_bases
ATGATGGGCGATCCTAGGGAGCTTTTCTGGGAAGACGAGGGGCTCACCGAGGGCCTCACCGACGAGGAGGCCCAGTTCCT
CTTGGGCTGGCTCATGGACGTGGCCGAGGACCTGGACCCGGCCCACCTGGCCCACCTCCGCCGCCTCGGGCGGGAGATCA
CGCGGCTCGCCCGGGACTACGGGGTCCCCGTGGGGGAGCTCGTCCAGCTGGTGGAGCTGGCCTGGTCGGACCCGGAGCCC
GAGGGGCTCCAGGCGTGA

Upstream 100 bases:

>100_bases
TTAAGGAGGAGGTGCGGGCCGCCCGCGACCCCGCTTACCTCGAGGCCCTCCTCCGCCGGATGGGCTGGGTGCGGAAAGAC
GAGGAGGTCCGCCGCTGGCC

Downstream 100 bases:

>100_bases
CCTACACCGGCACGCCCTCCCCGAAGCGCGCCAGGCTCACCTCCTGCCCGCGGAGGGCGAGGAGCTTGCCTAGGGCGAGG
AGCTTTTCCTCTTCCCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP
EGLQA

Sequences:

>Translated_85_residues
MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP
EGLQA
>Mature_85_residues
MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDYGVPVGELVQLVELAWSDPEP
EGLQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9630; Mature: 9630

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDY
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GVPVGELVQLVELAWSDPEPEGLQA
CCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMGDPRELFWEDEGLTEGLTDEEAQFLLGWLMDVAEDLDPAHLAHLRRLGREITRLARDY
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GVPVGELVQLVELAWSDPEPEGLQA
CCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA