Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980182

Identifier: 55980182

GI number: 55980182

Start: 208824

End: 209621

Strand: Reverse

Name: 55980182

Synonym: TTHA0213

Alternate gene names: NA

Gene position: 209621-208824 (Counterclockwise)

Preceding gene: 55980183

Following gene: 55980181

Centisome position: 11.33

GC content: 70.55

Gene sequence:

>798_bases
ATGTGGCGGATTATGGCCCTGCTTTCGCTTTTCCTTGCGGCCTGCAACCTTTCCCTGAGCCCGCCTTTGGCGGGGGACCT
CCCCGTGGGGGGGAACCTGGTGGCCACCCTGCCCCCGGCCCAGGGGGCCTCCGGCGGAAGCCTGCGCCCGGGGGTGGCCG
TCTTCCGCCTTCTTCCCGACCAGGACGGGGCCGTGGAGGTGGCGGCGGTTTCGGCTGGGCTAGAGCTCAGCGCCCGGCTC
CGCCTGGTCCTTCTGGACGAAAGGGGCGTGGTCCAGGCGGTGAGCGTGGCCCGGAACTGGTTTGGGGCCTACCCCGAGGT
GGCCCCCTTAGGCCTGAGGCCCCAGGGGATCACCACCGACCCCGGGGTGCGCCTTAACTTCCGGGGGCAGGCGGGCCAGG
CCTACCACCTGCGGGTGGAGAACTACGCCCTGGCGGAGGACCGGGTGAACCTCTCCGCCACGGGGTTTGTGCCCAACCCC
TCGGGCAAGGGGGAGGCGTTGACCTCGGGAAGCGTCCAAGGGGCCATTGAGTTCGTCGGGGAGTTTGACCGCTACGACGT
TTCCGGGGCCGGGGGCTACCTGCGTTTTGTCTACGCGGGCCCTCTGGACCTGGTGGCCCTCCTCTACAACGGTCCCGACG
ACCTCTACCCGAGGGCTTTGGACCCGGTGCGAAACTGCGCCCCCCTCTCCCCGGCCACCCTCCTCGTGGTCCGGGACCGG
GGCCTCGCCCGGGCGGGGTTTGACGAGGAGGGGAGCGGCCGTTACACCCTGGAGCTCTCCTCCACGCCCTGCCCTTAG

Upstream 100 bases:

>100_bases
CAAGCCGGGGCTTTGGGGAGGCTTTTGCACCTAAAGGGCACCTTAACCCGGCCGGGCCCTTCCCCGGGTATCCTGAGGGG
AAAGAGGGAGGTGGAGGCGG

Downstream 100 bases:

>100_bases
GAGGATCATGAGGGCTAGATGAAGGTAGTTTAGCTTCTTGTAAGAAAACCTGCCGCGGCGCGTTCCCGTGCGCTGCGGCT
TTTTGAGTTTGCAAAAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MWRIMALLSLFLAACNLSLSPPLAGDLPVGGNLVATLPPAQGASGGSLRPGVAVFRLLPDQDGAVEVAAVSAGLELSARL
RLVLLDERGVVQAVSVARNWFGAYPEVAPLGLRPQGITTDPGVRLNFRGQAGQAYHLRVENYALAEDRVNLSATGFVPNP
SGKGEALTSGSVQGAIEFVGEFDRYDVSGAGGYLRFVYAGPLDLVALLYNGPDDLYPRALDPVRNCAPLSPATLLVVRDR
GLARAGFDEEGSGRYTLELSSTPCP

Sequences:

>Translated_265_residues
MWRIMALLSLFLAACNLSLSPPLAGDLPVGGNLVATLPPAQGASGGSLRPGVAVFRLLPDQDGAVEVAAVSAGLELSARL
RLVLLDERGVVQAVSVARNWFGAYPEVAPLGLRPQGITTDPGVRLNFRGQAGQAYHLRVENYALAEDRVNLSATGFVPNP
SGKGEALTSGSVQGAIEFVGEFDRYDVSGAGGYLRFVYAGPLDLVALLYNGPDDLYPRALDPVRNCAPLSPATLLVVRDR
GLARAGFDEEGSGRYTLELSSTPCP
>Mature_265_residues
MWRIMALLSLFLAACNLSLSPPLAGDLPVGGNLVATLPPAQGASGGSLRPGVAVFRLLPDQDGAVEVAAVSAGLELSARL
RLVLLDERGVVQAVSVARNWFGAYPEVAPLGLRPQGITTDPGVRLNFRGQAGQAYHLRVENYALAEDRVNLSATGFVPNP
SGKGEALTSGSVQGAIEFVGEFDRYDVSGAGGYLRFVYAGPLDLVALLYNGPDDLYPRALDPVRNCAPLSPATLLVVRDR
GLARAGFDEEGSGRYTLELSSTPCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27832; Mature: 27832

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRIMALLSLFLAACNLSLSPPLAGDLPVGGNLVATLPPAQGASGGSLRPGVAVFRLLPD
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECC
QDGAVEVAAVSAGLELSARLRLVLLDERGVVQAVSVARNWFGAYPEVAPLGLRPQGITTD
CCCCEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGVRLNFRGQAGQAYHLRVENYALAEDRVNLSATGFVPNPSGKGEALTSGSVQGAIEFVG
CCEEEEEECCCCCEEEEEECCEEEECCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHH
EFDRYDVSGAGGYLRFVYAGPLDLVALLYNGPDDLYPRALDPVRNCAPLSPATLLVVRDR
CCCCEECCCCCCEEEEEEECHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC
GLARAGFDEEGSGRYTLELSSTPCP
CCEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MWRIMALLSLFLAACNLSLSPPLAGDLPVGGNLVATLPPAQGASGGSLRPGVAVFRLLPD
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECC
QDGAVEVAAVSAGLELSARLRLVLLDERGVVQAVSVARNWFGAYPEVAPLGLRPQGITTD
CCCCEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGVRLNFRGQAGQAYHLRVENYALAEDRVNLSATGFVPNPSGKGEALTSGSVQGAIEFVG
CCEEEEEECCCCCEEEEEECCEEEECCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHH
EFDRYDVSGAGGYLRFVYAGPLDLVALLYNGPDDLYPRALDPVRNCAPLSPATLLVVRDR
CCCCEECCCCCCEEEEEEECHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC
GLARAGFDEEGSGRYTLELSSTPCP
CCEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA