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The map label for this gene is yiaN [C]

Identifier: 55980164

GI number: 55980164

Start: 190104

End: 191603

Strand: Direct

Name: yiaN [C]

Synonym: TTHA0195

Alternate gene names: 55980164

Gene position: 190104-191603 (Clockwise)

Preceding gene: 55980163

Following gene: 55980168

Centisome position: 10.28

GC content: 67.13

Gene sequence:

>1500_bases
GTGGACCTCTACGCCGTCATGCCCCCCCTGATGTTCGCCGCCCTGGTGGTCTTCCTGCTCTCCGGCTACCCCGTGGCCTT
CTCCCTAGGGGCGGTGGGGATCGTCTTCGGCTTCCTGGGCATCGCCCTGGACCTCTTCCCCCCGGCCCTCCTCAAGGCCA
TGCCGGACCGCATCTTCGGCATCATGTCCAACCAGCTCCTCCTGGCCATCCCCTTCTTCACCTTCATGGGCATCATCCTG
GAGAAGAGCGGCCTCGCCGAGGACCTCCTGGACACCATGGGCCGCCTCTTCGGTCCCCTAAGGGGCGGGCTCGCCCTCAG
CGTGGTCTTCGTGGGGGCCATCCTCGCCGCCACCACGGGGGTCGTGGCCGCGAGCGTCATGGCCATGGGCCTCATCTCCC
TGCCGGTGATGCTCAAGTACGGCTACAACCCCCGTGTCGCCAGCGGGGTGATCCTGGGCTCGGCCACCCTGGCCCAGATC
ATCCCCCCGAGCGTGGTCCTCATCGTGCTGGCCGACCAGCTCGGGGTGAGCGTGGGGGACATGTACGTGGCCGCCCTCGT
TCCCTCGGCCCTCACCGTGGGCCTCTACTTCCTTTACGTGATCTACCTCGCCCTCTTCCGCCCCCAGTGGGTCCCCGCCC
TGCCCCCCGAGGCGCGGCCCGAGGCGGGGAAGGAGCCCGAGGCCGCCTTCGCCCTCCTCTCCTACCTCCTCGTGGCCGTG
GGGTCGTGGAAGCTTGGGGGGTTCCTCCACCTCCCCGGGTGGCTCGAGGGCCTCGAGGTCCTCTTGGGCCTCGCCCTCTG
GACCCTCCTCCTCCTCCCCCGGATCCGGCGAAATCCCCTCCTCCGCCGGGCCCTCTTCTCCATGGTCCCGCCCCTCGTCC
TCATCTTCCTGGTCCTGGGCACGGTCCTCATCGGCCTCGCCACCCCCACGGAGGCCGGGGCCATGGGGGTGGTGGGGGCC
CTCCTCCTCGCCGCCTTGAACCGCCGGCTTTCCTTCCCCGTCCTCTACCAGGCCATGGAGGGCACGGCCAAGCTCACCGC
CTTCGTCATCTTCATCCTCATCGGCTCCACCCTCTTCAGCCTGGTCTTCCGGGGCGTGGACGGGGACCTCTGGGTGGAGG
GCTTCCTCACGGGGCTTCCCGGGGGCGAAGTGGGGTTTATCGTCTTCGTCATGGTTCTCGTCTTTCTCCTGGGCTTCTTC
ATTGACTTCTTTGAGATCGCCTTCATCGTCCTTCCCCTCCTCGCCCTCGGCGCCGACGCCTTGAACATTGACAAGGTCTG
GTTCGGCCTCCTCGTGGGCGTGAACCTCCAGACCTCCTTCCTCACCCCGCCCTTCGGCTTTGCCCTCTTCTACCTCCGCA
ACGTGGCCCCCAAGGAGGTGAAGACGCTGGACATCTACCAAGGCGGCCTTCCCTTCATCGGCCTCCAGCTCCTCGTCCTC
GTCCTCACCTACCTCCTCCAGGAGCCGATCATGGAGTTCGTGCGGAACTTCCGCTTCTAA

Upstream 100 bases:

>100_bases
CTCGCCCTCCAGGGCCTCTCCGAGCTCATCAAGCGGCTGGCCTTTCTGACCGGGCACCTGCCCGACTGGACGCCCGGGGA
AGAGGAGGAGGTGGTCTGAG

Downstream 100 bases:

>100_bases
GGACCGCGGCGAAGCACTGCAAAAGGCCCCCAGGGCAAGCCCTGGGGGCCTCGGCCTTCGCCCGGATCAGACGCCCGGGA
AGGCGAACTGGGCGTAGCCC

Product: tripartite transporter, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MDLYAVMPPLMFAALVVFLLSGYPVAFSLGAVGIVFGFLGIALDLFPPALLKAMPDRIFGIMSNQLLLAIPFFTFMGIIL
EKSGLAEDLLDTMGRLFGPLRGGLALSVVFVGAILAATTGVVAASVMAMGLISLPVMLKYGYNPRVASGVILGSATLAQI
IPPSVVLIVLADQLGVSVGDMYVAALVPSALTVGLYFLYVIYLALFRPQWVPALPPEARPEAGKEPEAAFALLSYLLVAV
GSWKLGGFLHLPGWLEGLEVLLGLALWTLLLLPRIRRNPLLRRALFSMVPPLVLIFLVLGTVLIGLATPTEAGAMGVVGA
LLLAALNRRLSFPVLYQAMEGTAKLTAFVIFILIGSTLFSLVFRGVDGDLWVEGFLTGLPGGEVGFIVFVMVLVFLLGFF
IDFFEIAFIVLPLLALGADALNIDKVWFGLLVGVNLQTSFLTPPFGFALFYLRNVAPKEVKTLDIYQGGLPFIGLQLLVL
VLTYLLQEPIMEFVRNFRF

Sequences:

>Translated_499_residues
MDLYAVMPPLMFAALVVFLLSGYPVAFSLGAVGIVFGFLGIALDLFPPALLKAMPDRIFGIMSNQLLLAIPFFTFMGIIL
EKSGLAEDLLDTMGRLFGPLRGGLALSVVFVGAILAATTGVVAASVMAMGLISLPVMLKYGYNPRVASGVILGSATLAQI
IPPSVVLIVLADQLGVSVGDMYVAALVPSALTVGLYFLYVIYLALFRPQWVPALPPEARPEAGKEPEAAFALLSYLLVAV
GSWKLGGFLHLPGWLEGLEVLLGLALWTLLLLPRIRRNPLLRRALFSMVPPLVLIFLVLGTVLIGLATPTEAGAMGVVGA
LLLAALNRRLSFPVLYQAMEGTAKLTAFVIFILIGSTLFSLVFRGVDGDLWVEGFLTGLPGGEVGFIVFVMVLVFLLGFF
IDFFEIAFIVLPLLALGADALNIDKVWFGLLVGVNLQTSFLTPPFGFALFYLRNVAPKEVKTLDIYQGGLPFIGLQLLVL
VLTYLLQEPIMEFVRNFRF
>Mature_499_residues
MDLYAVMPPLMFAALVVFLLSGYPVAFSLGAVGIVFGFLGIALDLFPPALLKAMPDRIFGIMSNQLLLAIPFFTFMGIIL
EKSGLAEDLLDTMGRLFGPLRGGLALSVVFVGAILAATTGVVAASVMAMGLISLPVMLKYGYNPRVASGVILGSATLAQI
IPPSVVLIVLADQLGVSVGDMYVAALVPSALTVGLYFLYVIYLALFRPQWVPALPPEARPEAGKEPEAAFALLSYLLVAV
GSWKLGGFLHLPGWLEGLEVLLGLALWTLLLLPRIRRNPLLRRALFSMVPPLVLIFLVLGTVLIGLATPTEAGAMGVVGA
LLLAALNRRLSFPVLYQAMEGTAKLTAFVIFILIGSTLFSLVFRGVDGDLWVEGFLTGLPGGEVGFIVFVMVLVFLLGFF
IDFFEIAFIVLPLLALGADALNIDKVWFGLLVGVNLQTSFLTPPFGFALFYLRNVAPKEVKTLDIYQGGLPFIGLQLLVL
VLTYLLQEPIMEFVRNFRF

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 53718; Mature: 53718

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]