| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980134
Identifier: 55980134
GI number: 55980134
Start: 161379
End: 161861
Strand: Reverse
Name: 55980134
Synonym: TTHA0165
Alternate gene names: NA
Gene position: 161861-161379 (Counterclockwise)
Preceding gene: 55980135
Following gene: 55980133
Centisome position: 8.75
GC content: 73.71
Gene sequence:
>483_bases ATGCCCTCGGGGCGCGCCCACGAGGCCTTGAACCTGGCGGCGCTGGGCGGGTTGGCCCTGGCCCACCTGGCGGCGGGGGG CTCTCCGGAGGACCCCCGGGCCTGGGCCTTCGGCCTCGCCTACCTGGCGGGCACTTACCTCCTCTCCCCCGACCTGGACC TGGCGGAGCGGGGGGTGAGGGCGAGCCGCCGCTGGGGGATTTTTGCCGCCTTCTGGCGCCCATACGGCTGGCTCTTTAGG CACCGGGGCCTCTCCCACACCTGGCTGCTTGGGCCCCTCACCCGGCTCGCCTACCTGGGGGCTTGGGTGGGGCTCCTCCT CCTGGTCCTGCGCTGGACTCTGGGCCTCCAGGTCTCCCTGGACCTTCCCCCGGAGCTGTGGGGCTTCGGCCTGCTCGGCT ACTACGCCTCCCAGTGGCTCCACCTCCTCGCGGACGGGATCCGGCCCGACCACGGCCTGAAGCGCCTGCGCCGTCCCCGG TGA
Upstream 100 bases:
>100_bases GCCGGCGGGGCCGAGTACACGGGCCGGGGCGTCCGCGGCCTGAGGGTGGACGTCCTCTCCACGGGCGAGCGCTTCCCCCT TCCTAGCCTATAATCGGGGC
Downstream 100 bases:
>100_bases GGGCGCTCACCTTCCGCAAAACCTCTTCTGCCATACTGAAGCCATGACCAAACTCTGGACCCTTCTCGTGGCGGGCGCGC TGAGCCTGGCCCTGGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPSGRAHEALNLAALGGLALAHLAAGGSPEDPRAWAFGLAYLAGTYLLSPDLDLAERGVRASRRWGIFAAFWRPYGWLFR HRGLSHTWLLGPLTRLAYLGAWVGLLLLVLRWTLGLQVSLDLPPELWGFGLLGYYASQWLHLLADGIRPDHGLKRLRRPR
Sequences:
>Translated_160_residues MPSGRAHEALNLAALGGLALAHLAAGGSPEDPRAWAFGLAYLAGTYLLSPDLDLAERGVRASRRWGIFAAFWRPYGWLFR HRGLSHTWLLGPLTRLAYLGAWVGLLLLVLRWTLGLQVSLDLPPELWGFGLLGYYASQWLHLLADGIRPDHGLKRLRRPR >Mature_159_residues PSGRAHEALNLAALGGLALAHLAAGGSPEDPRAWAFGLAYLAGTYLLSPDLDLAERGVRASRRWGIFAAFWRPYGWLFRH RGLSHTWLLGPLTRLAYLGAWVGLLLLVLRWTLGLQVSLDLPPELWGFGLLGYYASQWLHLLADGIRPDHGLKRLRRPR
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17812; Mature: 17681
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGRAHEALNLAALGGLALAHLAAGGSPEDPRAWAFGLAYLAGTYLLSPDLDLAERGVR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCHH ASRRWGIFAAFWRPYGWLFRHRGLSHTWLLGPLTRLAYLGAWVGLLLLVLRWTLGLQVSL HHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE DLPPELWGFGLLGYYASQWLHLLADGIRPDHGLKRLRRPR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure PSGRAHEALNLAALGGLALAHLAAGGSPEDPRAWAFGLAYLAGTYLLSPDLDLAERGVR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCHH ASRRWGIFAAFWRPYGWLFRHRGLSHTWLLGPLTRLAYLGAWVGLLLLVLRWTLGLQVSL HHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE DLPPELWGFGLLGYYASQWLHLLADGIRPDHGLKRLRRPR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA