| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980080
Identifier: 55980080
GI number: 55980080
Start: 111167
End: 112300
Strand: Reverse
Name: 55980080
Synonym: TTHA0111
Alternate gene names: NA
Gene position: 112300-111167 (Counterclockwise)
Preceding gene: 55980081
Following gene: 55980079
Centisome position: 6.07
GC content: 70.46
Gene sequence:
>1134_bases GTGCGCGCGCCCGTCTACCGCTTCCTCCTCGCCGGCTTTCTCTGGTCCTTCGGGGCCAACCTCGTCTACTTCTTCCTCAA CTTCCACCTCGAGGCCTTGGGCTTTTCCCGCCAGGCCATCGGCCTGGCCCAGGCGGTGGTCCTCCTCTCCGGGGTGGCCT TCGCCTGGCCCCTCGCCCGGCTCATCCCCCGGGTGGGGTATGTGCGGAGCCTGGAGCTCGCCTTCCTCCTCGGCGTGGGC GGAGGGGTCCTTTTGGGCCTTGGGCTTTTCGTCTTCCCCGGCCTCGCCCTCTACGGCCTGGCGGGGGCCTTGGTCCAGGG GGCGGCGGCTCCCCTCCTCGCCCGCCTCGTCCCCGAGGAAAGGCGGGTGGCCTTCTTCAGCCTCCAGGCCGCCCTCACCA CGGCAAGCGGCTTCTTCTCCACCCTGCTTGCGGGCTACCTCTCGGACCTCCTTGGGGCGCGGTGGGTCCTCCTTTTCGCC CTCCCCTTCTTCGCCCTCGCCTACCCCTTGGTCCGGGGGCTTCCCCGGGGGGGCGGGGAGGGGAAGCCCTTCCGCTTCCG CGGCCGGTTTAGGGCTTGGCTCCGCCTCCTTTTGCCCCAGGTGGTCATCGGCTTCGGGGCGGGGCTCGTCATCCCCTTCC TGAACCTCTTCCTCAAGGAGAAGTTCGGCCTCTCCTACGGGACCACGGGCCTCCTCTTCGCCCTCTCCTCCCTGGCCACG GGGGCGGCCATGCTCCTCCAGCCCTTCCTCGCCGGGAGGCTCGGGCGGCTTGGGGCCATCGTCTTCGTCCAGGCCCTCTC CCTGCCCTTCCTCGCCGCCTTGGCCTGGGCCCCATGGCTTCCCCTGGTCACCCTCGCCCTCCTCATCCGGGGGGCCCTGA TGAACGCCGCCGGGCCCGTCTACGCCGCCTTGGTCATGGACTACCTGACCGAGGAGGAGCGCCCCGGCTTCTTCCTCCTG GAAAGCGCCCTCTGGAGCCTCCTCTTCGCCCTGGGAAGCGCCCTCTCCGGGGCGGTGCAGGAGGCCCTGGGCCTCAAGGC CTTTGACCTCCTCTTCGGGGGGACCCTGGCCCTCTACGCCCTGGGCATCCTGCTCTGGCCCTGGGCCTTCCGGGGGCTTG AGCGGGTAGACTGA
Upstream 100 bases:
>100_bases ACGGCCGCTACGTCTGCACCGCAAGGAGGCCCCGCTGCCGGGCCTGCGTCCTTGCGCCCTACTGCCCGAGCCGCGAGGCC TGATCTCGGAGGAGGCCTTC
Downstream 100 bases:
>100_bases GGTCCGATGCGGACGAACCTCTCCGTGGAGGAAGCCCTGGAGGCGGTCCTCGAGGCGGCCCAGGGGGAGCTAGCCGTGGA GGAGCTCCCCCTAAAGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRAPVYRFLLAGFLWSFGANLVYFFLNFHLEALGFSRQAIGLAQAVVLLSGVAFAWPLARLIPRVGYVRSLELAFLLGVG GGVLLGLGLFVFPGLALYGLAGALVQGAAAPLLARLVPEERRVAFFSLQAALTTASGFFSTLLAGYLSDLLGARWVLLFA LPFFALAYPLVRGLPRGGGEGKPFRFRGRFRAWLRLLLPQVVIGFGAGLVIPFLNLFLKEKFGLSYGTTGLLFALSSLAT GAAMLLQPFLAGRLGRLGAIVFVQALSLPFLAALAWAPWLPLVTLALLIRGALMNAAGPVYAALVMDYLTEEERPGFFLL ESALWSLLFALGSALSGAVQEALGLKAFDLLFGGTLALYALGILLWPWAFRGLERVD
Sequences:
>Translated_377_residues MRAPVYRFLLAGFLWSFGANLVYFFLNFHLEALGFSRQAIGLAQAVVLLSGVAFAWPLARLIPRVGYVRSLELAFLLGVG GGVLLGLGLFVFPGLALYGLAGALVQGAAAPLLARLVPEERRVAFFSLQAALTTASGFFSTLLAGYLSDLLGARWVLLFA LPFFALAYPLVRGLPRGGGEGKPFRFRGRFRAWLRLLLPQVVIGFGAGLVIPFLNLFLKEKFGLSYGTTGLLFALSSLAT GAAMLLQPFLAGRLGRLGAIVFVQALSLPFLAALAWAPWLPLVTLALLIRGALMNAAGPVYAALVMDYLTEEERPGFFLL ESALWSLLFALGSALSGAVQEALGLKAFDLLFGGTLALYALGILLWPWAFRGLERVD >Mature_377_residues MRAPVYRFLLAGFLWSFGANLVYFFLNFHLEALGFSRQAIGLAQAVVLLSGVAFAWPLARLIPRVGYVRSLELAFLLGVG GGVLLGLGLFVFPGLALYGLAGALVQGAAAPLLARLVPEERRVAFFSLQAALTTASGFFSTLLAGYLSDLLGARWVLLFA LPFFALAYPLVRGLPRGGGEGKPFRFRGRFRAWLRLLLPQVVIGFGAGLVIPFLNLFLKEKFGLSYGTTGLLFALSSLAT GAAMLLQPFLAGRLGRLGAIVFVQALSLPFLAALAWAPWLPLVTLALLIRGALMNAAGPVYAALVMDYLTEEERPGFFLL ESALWSLLFALGSALSGAVQEALGLKAFDLLFGGTLALYALGILLWPWAFRGLERVD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40476; Mature: 40476
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPVYRFLLAGFLWSFGANLVYFFLNFHLEALGFSRQAIGLAQAVVLLSGVAFAWPLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIPRVGYVRSLELAFLLGVGGGVLLGLGLFVFPGLALYGLAGALVQGAAAPLLARLVPEE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RRVAFFSLQAALTTASGFFSTLLAGYLSDLLGARWVLLFALPFFALAYPLVRGLPRGGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GKPFRFRGRFRAWLRLLLPQVVIGFGAGLVIPFLNLFLKEKFGLSYGTTGLLFALSSLAT CCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GAAMLLQPFLAGRLGRLGAIVFVQALSLPFLAALAWAPWLPLVTLALLIRGALMNAAGPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH YAALVMDYLTEEERPGFFLLESALWSLLFALGSALSGAVQEALGLKAFDLLFGGTLALYA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGILLWPWAFRGLERVD HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAPVYRFLLAGFLWSFGANLVYFFLNFHLEALGFSRQAIGLAQAVVLLSGVAFAWPLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIPRVGYVRSLELAFLLGVGGGVLLGLGLFVFPGLALYGLAGALVQGAAAPLLARLVPEE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RRVAFFSLQAALTTASGFFSTLLAGYLSDLLGARWVLLFALPFFALAYPLVRGLPRGGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GKPFRFRGRFRAWLRLLLPQVVIGFGAGLVIPFLNLFLKEKFGLSYGTTGLLFALSSLAT CCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GAAMLLQPFLAGRLGRLGAIVFVQALSLPFLAALAWAPWLPLVTLALLIRGALMNAAGPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH YAALVMDYLTEEERPGFFLLESALWSLLFALGSALSGAVQEALGLKAFDLLFGGTLALYA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGILLWPWAFRGLERVD HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA