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The map label for this gene is 55980047

Identifier: 55980047

GI number: 55980047

Start: 79613

End: 80332

Strand: Reverse

Name: 55980047

Synonym: TTHA0078

Alternate gene names: NA

Gene position: 80332-79613 (Counterclockwise)

Preceding gene: 55980048

Following gene: 55980043

Centisome position: 4.34

GC content: 71.39

Gene sequence:

>720_bases
GTGGTCCTCGCCGCCTTGGTCCTGGTCCTCGAGGGAGAAGGCCTCCCCGAGCCCTTGGGCCTCAGGGGCTTCTTCTACGG
CCTCCTTCGGGAGGTGGCCCCGGAGGTGCACGACCAGGGGGAAAACCCCTTCGCCCTGGGCTTCGGGGGGCGGGAGGGGG
CGGCTTGGGCCCGGGTGAGCCTGCTTGTGGAAGGGCTTTACGCCCGCCTCGCCCCCCGCCTCTACGCCCTGGAGGGGGAG
GAGGTGCGGCTTGGGCCCCCTTTCCGGGTGCGGGCCGTGCTCCAGGAGGGGCACCCCTGGGCGGGGGTTTCCACCTATCC
CCGCCTCTTTCAGGGGCCTCCTTCCCGGGACCTCGCCCTGCGCTTCGCCAGCCCCACCTTCTTCCGCAGAAAAGGGGTCC
ACTACCCGGTCCCCGAGCCGAGGTTGGTTTTGGAAAGCCTCCTCCGGCGCCTCGAGGCCTTTGGCCCCCTGAAGGCCCCG
GAAGGGGTGAGGGAGGCCCTTTTGGAGAGGACCACGGTGCGGAGCCTGGAGGGGCGGACCCTCCCCGCCCGCACGGAGGT
GGACACCGCGGGCTTCGTGGGGCGGGTGGTCTACCACCTGCCCCGGGCCACGGAGGAGGAGGCCCTTTGGCTTTCCGCCC
TAGGCCGCTTCGCCTTCTATAGCGGCGTGGGGGCCAAGACCTCCTTGGGCTACGGCCGCGCCCGGGCGGAAAGTGCCTAA

Upstream 100 bases:

>100_bases
TGGACCTGGGCCCGAACGCCCTGTCCATCGGCCTGGACCCGGACCGCCCCCCCCGCCCGGCCCAGGCCCGGCACGGGCTC
CTTTCCCCGGGGTTTTAGCC

Downstream 100 bases:

>100_bases
TCCCCCTTGGGCTTGCTTCGCCCTGCCGGACCGAGGGGAGGTCCTAGGCACCCCGCCGCGTTAAGGCGCGGGCCCTCAGT
CCAGGCCCAGGAGGGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVLAALVLVLEGEGLPEPLGLRGFFYGLLREVAPEVHDQGENPFALGFGGREGAAWARVSLLVEGLYARLAPRLYALEGE
EVRLGPPFRVRAVLQEGHPWAGVSTYPRLFQGPPSRDLALRFASPTFFRRKGVHYPVPEPRLVLESLLRRLEAFGPLKAP
EGVREALLERTTVRSLEGRTLPARTEVDTAGFVGRVVYHLPRATEEEALWLSALGRFAFYSGVGAKTSLGYGRARAESA

Sequences:

>Translated_239_residues
MVLAALVLVLEGEGLPEPLGLRGFFYGLLREVAPEVHDQGENPFALGFGGREGAAWARVSLLVEGLYARLAPRLYALEGE
EVRLGPPFRVRAVLQEGHPWAGVSTYPRLFQGPPSRDLALRFASPTFFRRKGVHYPVPEPRLVLESLLRRLEAFGPLKAP
EGVREALLERTTVRSLEGRTLPARTEVDTAGFVGRVVYHLPRATEEEALWLSALGRFAFYSGVGAKTSLGYGRARAESA
>Mature_239_residues
MVLAALVLVLEGEGLPEPLGLRGFFYGLLREVAPEVHDQGENPFALGFGGREGAAWARVSLLVEGLYARLAPRLYALEGE
EVRLGPPFRVRAVLQEGHPWAGVSTYPRLFQGPPSRDLALRFASPTFFRRKGVHYPVPEPRLVLESLLRRLEAFGPLKAP
EGVREALLERTTVRSLEGRTLPARTEVDTAGFVGRVVYHLPRATEEEALWLSALGRFAFYSGVGAKTSLGYGRARAESA

Specific function: Unknown

COG id: COG5551

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26261; Mature: 26261

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLAALVLVLEGEGLPEPLGLRGFFYGLLREVAPEVHDQGENPFALGFGGREGAAWARVS
CHHHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LLVEGLYARLAPRLYALEGEEVRLGPPFRVRAVLQEGHPWAGVSTYPRLFQGPPSRDLAL
HHHHHHHHHHCCHHEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEE
RFASPTFFRRKGVHYPVPEPRLVLESLLRRLEAFGPLKAPEGVREALLERTTVRSLEGRT
EECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
LPARTEVDTAGFVGRVVYHLPRATEEEALWLSALGRFAFYSGVGAKTSLGYGRARAESA
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MVLAALVLVLEGEGLPEPLGLRGFFYGLLREVAPEVHDQGENPFALGFGGREGAAWARVS
CHHHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LLVEGLYARLAPRLYALEGEEVRLGPPFRVRAVLQEGHPWAGVSTYPRLFQGPPSRDLAL
HHHHHHHHHHCCHHEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEE
RFASPTFFRRKGVHYPVPEPRLVLESLLRRLEAFGPLKAPEGVREALLERTTVRSLEGRT
EECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
LPARTEVDTAGFVGRVVYHLPRATEEEALWLSALGRFAFYSGVGAKTSLGYGRARAESA
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA