Click here to switch to the map view.

The map label for this gene is cobC [C]

Identifier: 55980019

GI number: 55980019

Start: 49489

End: 50172

Strand: Direct

Name: cobC [C]

Synonym: TTHA0050

Alternate gene names: 55980019

Gene position: 49489-50172 (Clockwise)

Preceding gene: 55980017

Following gene: 55980020

Centisome position: 2.68

GC content: 72.81

Gene sequence:

>684_bases
ATGGGCCTCCTCGCCCACTTCCTGAAGGGCCCCCACAAGAAGACCACCCTCCTCCTCACCCGGGCCGGGCCCGTGGAGAA
CCCCCGCCACGTGCTCTACAGCCACCCTGGGCTTCCCCTAAGCCCCAAGGGCCGAAGCGCCCTCCTCGCCCTCCTTCCCC
TCCTCCAAGGCTTCCCCGTGGCCCACGTCTACGCCGCCGACAGCCTGGCGGAGGCCGAGGCGGCCCGGCTTTTCGCCGAG
GCCCTGGGGGTGCCCTACACCCTCCTCCCCGAGCTGCGGGAACGGGCCTGGGGCGCCTGGGAGGGGCTTTCCTTCCCCGA
GGTGGAGGCCCGCTTCCCCGGGGCCGTGGCCGCCTGGACGGCGGACGAGGCGGGCTTCGCCCCGCCCGGGGGAGAGAGCG
TGCGGGAGGCCTGGGAACGGGGGAGGCGGGCGGTGAAGGCGCTCCTCGGGAAGCACCGGGGCCAGGCCATCCTCGTGGTG
GGGAACTGCACCCTCAACCGGGCCGCCCTAAGCCTCGCCCTCCCCTTACCCCCTGAAGAGGGCCTCAGGCTGGAGCAGGA
CTACGCCCGGCTCTCCGTGGTGGACTTCTACGGGGAGGAGGGGGTGGTGAAGGCCCTGAACCTGGCGGTAGACTGGGGGC
ATGATCCGGCCCGTGGCCCGCAAGGACCTCCCGGGGCTTCTTAG

Upstream 100 bases:

>100_bases
CGGGCCGCCTTCAGGATGGCCCCGGAAAGCCTCCCCACCTTGCCGCGGCCCCCGGCGGGGTTCACGATGACCCACTTCTC
CACCCCCGTATTCTACGGAT

Downstream 100 bases:

>100_bases
GCTCCTCCGCCACATGGACCAAAGCCCCGAACGGGGCGTCCTCGCCCCGGAGGCCAGGGACCTCGAGGGCCTCGCCGAGG
AGCTGGAGGACGGCCTCGTC

Product: phosphoglycerate mutase family protein

Products: NA

Alternate protein names: Phosphoglycerate Mutase Family Protein; Phosphoglucomutase/Phosphomannomutase Family Protein

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGLLAHFLKGPHKKTTLLLTRAGPVENPRHVLYSHPGLPLSPKGRSALLALLPLLQGFPVAHVYAADSLAEAEAARLFAE
ALGVPYTLLPELRERAWGAWEGLSFPEVEARFPGAVAAWTADEAGFAPPGGESVREAWERGRRAVKALLGKHRGQAILVV
GNCTLNRAALSLALPLPPEEGLRLEQDYARLSVVDFYGEEGVVKALNLAVDWGHDPARGPQGPPGAS

Sequences:

>Translated_227_residues
MGLLAHFLKGPHKKTTLLLTRAGPVENPRHVLYSHPGLPLSPKGRSALLALLPLLQGFPVAHVYAADSLAEAEAARLFAE
ALGVPYTLLPELRERAWGAWEGLSFPEVEARFPGAVAAWTADEAGFAPPGGESVREAWERGRRAVKALLGKHRGQAILVV
GNCTLNRAALSLALPLPPEEGLRLEQDYARLSVVDFYGEEGVVKALNLAVDWGHDPARGPQGPPGAS
>Mature_226_residues
GLLAHFLKGPHKKTTLLLTRAGPVENPRHVLYSHPGLPLSPKGRSALLALLPLLQGFPVAHVYAADSLAEAEAARLFAEA
LGVPYTLLPELRERAWGAWEGLSFPEVEARFPGAVAAWTADEAGFAPPGGESVREAWERGRRAVKALLGKHRGQAILVVG
NCTLNRAALSLALPLPPEEGLRLEQDYARLSVVDFYGEEGVVKALNLAVDWGHDPARGPQGPPGAS

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 24245; Mature: 24114

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLAHFLKGPHKKTTLLLTRAGPVENPRHVLYSHPGLPLSPKGRSALLALLPLLQGFPV
CCHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCE
AHVYAADSLAEAEAARLFAEALGVPYTLLPELRERAWGAWEGLSFPEVEARFPGAVAAWT
EEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEEC
ADEAGFAPPGGESVREAWERGRRAVKALLGKHRGQAILVVGNCTLNRAALSLALPLPPEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEEECCCCCCC
GLRLEQDYARLSVVDFYGEEGVVKALNLAVDWGHDPARGPQGPPGAS
CCEEHHHHHHEEEEEECCCCCCEEHEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLLAHFLKGPHKKTTLLLTRAGPVENPRHVLYSHPGLPLSPKGRSALLALLPLLQGFPV
CHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCE
AHVYAADSLAEAEAARLFAEALGVPYTLLPELRERAWGAWEGLSFPEVEARFPGAVAAWT
EEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEEC
ADEAGFAPPGGESVREAWERGRRAVKALLGKHRGQAILVVGNCTLNRAALSLALPLPPEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEEECCCCCCC
GLRLEQDYARLSVVDFYGEEGVVKALNLAVDWGHDPARGPQGPPGAS
CCEEHHHHHHEEEEEECCCCCCEEHEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA