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The map label for this gene is snf

Identifier: 55822225

GI number:

Start: 242365

End: 245460

Strand: Direct

Name: snf

Synonym: str0237

Alternate gene names: NA

Gene position: NA

Preceding gene: 55822224

Following gene: 55822226

Centisome position: NA

GC content: NA

Gene sequence:

>3096_bases
ATGGCGAAATTGATTCCGGGTAGAGTCCGTAATGAGGGAATTAAACTTTTTGAAAAGGGTTTAATTGCCATTAGTCAGGT
CTCAGAAACTCAGTTGGACACGACGGTTGACCAACATCATTTAATTTATGCACTCGATGATCCTGAAATCATGTGTGACT
GTGATTTTTTCGCTCAAAAAGGCTATTGCTCCCATTTGGCAGCGGTTGAGTACTATCTAAAAAATGCTAAGGAGGGCCAG
CGTCTCTTAGCAAAATTAGAGGAGAAACAAGAGTCCGCCCAGGACCAAGAGCGGGGGCGTTCTTTTGGTGGTTTATTTTT
AGAGAGCCTTTCTCTGAATGAGGATGATACAGTTAGATATAGCCTCACGGTAGAGGGAGAGGAATCTACCTTTGGTTCAG
AGATTTGGTGGAGTTTACGTTTACGTCGCTTACCGGACGAACGTTCTTACGTTGTTCGAGATATCCCAGCCTTCCTCAAG
CTTATAGAGACTGAAGGCTATTATCAGATAGGTAAGAATTACTATGAACCTCTATCACTCATTCAGTTTGACCAGGCTTC
ACAAGCATTTTTAGACTTTTTAGGACGGATGATTCCAGATGAAGCCAAAACAAATTTAACCTTTATTTTACCGAATAATG
CACGACACCTTAGTCTCCCCTATGGTTTTTTTGAGGAGGGATTGAGGTTGATGCAAGATTTGGATGGCTTCAGGTTTGAA
TGGGAAGGTATTGAATATCGCAGCTTTTTGGTAGAGGACTTGACTGCTGAAGCCAATCTTTTCTCGTTTGATATTTGTGT
CGAGCCCAAAATGATTGAATTGACTGTTGCTGAGAAAAATAGCCAAACATTTTTTAATAATCGTATTATCTTTTATCAGG
GTGTTTTCTATCGTCTTAATAGAAAACAGCAAAAAATTTTGCTTGGCTTACGTTCTCTCCCTATCGGAAGCGATTTGAAT
AAACATGTCAGTTTTAATCTAGAAGAACAAGCTATCTTAGCTGCTAGTCTTTCTGATTTTAAGACTATGGGACCGGTTAA
AGCCCCAAAAGCGTTTAATATCAAAGATTTCACCCCGAGATTTCGCTTTGATTTGAAAGGTGAACGCGAGGTTGTGCTCA
CATTGGCTTTTGATTTTGATGGATATGTTGTGGATAATCGTTATGAGTTAAGTCATTTAGGCTTTACTAGTAACTATCGT
AATGAACAGGCTATTTTTCGTTTGATGGTTAAACATGGATTTACCCCTGATTTTCAGTCATCTAAACGCTTAAATAGCAA
TCAAGAGCTCTATGATTTCTTTATAAATACTCTACCAGCTTTTGAAAATGCAGGGCCAGTTCTTATTGGACAGGAGTTGC
GTGACTTACGTGTTGAACAGAGTCCACAAATTCAGGTGGAGCGTCAAGGAAATCTATTAGATATTTCGTTTGATTTTTCA
AGTCTCGATGATGAGGATGTGGATCATGCTTTAGAAGCTTTGATGGACAGAGCGCCCTACTTTGTTAATCGTAGTGGTCA
GTTGATTGTTTTTGATGAGGGGACACAACGTATCAGTGAGAGTCTAAGAACTTTGAGGGCCCGTTATTCGGGGGAAGGGC
ATCTAGAACTCCATCAATTAGCCGCCTATCAATTGATGGACTCTCTTTCAGAAAATGATTCTGTTCGTTTTTCAGAAGAT
TTTCAACAGCTAGCGCAACATTTGAGAAAACCGGAAACGTTCGACTTGCCATCCTATCATGTAGAAGTTGACCTTCGTCC
TTACCAAGAAAGAGGAGTTCAATGGCTATCAATGTTGCATCACTATGGTTTTGGTGGTATTTTAGCCGACGATATGGGGT
TGGGGAAAACTTTACAGACCATTGCTTATCTTTCTGCACATTTAGAGGATGGACAACGAGTCTTGGTTCTATCGCCATCG
AGTTTAATTTACAATTGGCAGGATGAGTTTAAAAAATTTGCTCCTCAGTTAGATGTAGCAGTTTCTTATGGACTTAAGCC
AAAACGTGATGAGATCATTGCAGAAGACCATCAGATTATTATTACTAGCTATGCTTCATTCCGTCAGGATTTTGATGTTT
ATAAGGCTGGTCAGTATGATTATCTCATTCTAGATGAGGCACAGGTCATGAAGAATACTCAGACGAAGATTGCTCAATAT
TTACGTGATTTTTCTGTTCCGCATTGCCTAGCTCTATCTGGAACGCCTATTGAAAATCATTTGTTGGAGATTTGGTCTAT
TTTCCAGATTGTTTTACCGGGGCTTTTACCAGCTAAGAAAACTTTTCTTAAGCTAACACCTATGGAAGTGGCCCGGTACA
TTACTCCATTTATTCTTAGACGTAAAAAAGATGAGGTTCTTCCTGATTTACCGGACCTGATTGAAATTACGCACCAAAGT
GAATTGTCGGATAGTCAAAAGGCTATTTATTTAGCACAATTGCAACAGATGCAACAAGGTTTAATTTCAGCAAGTGATCA
GGAAATCAATCGTCGTAAGGTGGAAATTTTGTCAGGAATTACCCGCTTACGCCAAATCTGTGACACGCCAGCCCTCTTTA
TGGATTACGCTGGTGATAGTGGGAAATTAGATAGTCTTAGAGACCTACTTAGTCAAATTAAGGAATCAGACCATCGTGTC
CTTATTTTTTCACAATTTCGTGGGATGTTAGATATTACAGAGGAACTTTTACAAGAGTTAGGTATTTCCTCTTATAAGCT
AACAGGGTCGACCCCATCTGATAGTCGTCAGGAGATGACCAGAGCCTTCAATCAGGGGAGTCGAGATGCCTTTTTGATTT
CTTTAAAAGCAGGGGGGGTAGGGCTCAACTTGACTGGTGCTGATACAGTTATTCTGATTGACCTTTGGTGGAATCCAGCG
GTGGAAATGCAGGCTATTAGTCGTGCTCATCGTATAGGTCAGAAACAAAATGTCGAAGTTTTCCGTTTGATTACAAGAGG
TACTATCGAAGAGAAGATTCTTGAGCTTCAAGAAGGTAAGAAAAATCTCGTTACAACAGTATTAGATGGCAATGAAAGCT
GTGCTAGCATGACAGTTGAGGATATTAAAGAAATTCTTGGTATTGCAATATCTTAA

Upstream 100 bases:

>100_bases
CGACACTCCCTAGGGAGTGTTTTTTTTGTTTTATCTTTGTGAAGTCCGAGTTTATAAGAGTTTTGTGCTATAATAGGGGG
ATAAGATAGGGGTGAATACT

Downstream 100 bases:

>100_bases
TCTGTTATATTTAATATTGGAATACTAAGATATAAAAATGACACTAGGCAAATCTTTTGAACTAGGCTATAATAGAATAT
TGCAAGACGTATCTCCCCAT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1031_residues
MAKLIPGRVRNEGIKLFEKGLIAISQVSETQLDTTVDQHHLIYALDDPEIMCDCDFFAQKGYCSHLAAVEYYLKNAKEGQ
RLLAKLEEKQESAQDQERGRSFGGLFLESLSLNEDDTVRYSLTVEGEESTFGSEIWWSLRLRRLPDERSYVVRDIPAFLK
LIETEGYYQIGKNYYEPLSLIQFDQASQAFLDFLGRMIPDEAKTNLTFILPNNARHLSLPYGFFEEGLRLMQDLDGFRFE
WEGIEYRSFLVEDLTAEANLFSFDICVEPKMIELTVAEKNSQTFFNNRIIFYQGVFYRLNRKQQKILLGLRSLPIGSDLN
KHVSFNLEEQAILAASLSDFKTMGPVKAPKAFNIKDFTPRFRFDLKGEREVVLTLAFDFDGYVVDNRYELSHLGFTSNYR
NEQAIFRLMVKHGFTPDFQSSKRLNSNQELYDFFINTLPAFENAGPVLIGQELRDLRVEQSPQIQVERQGNLLDISFDFS
SLDDEDVDHALEALMDRAPYFVNRSGQLIVFDEGTQRISESLRTLRARYSGEGHLELHQLAAYQLMDSLSENDSVRFSED
FQQLAQHLRKPETFDLPSYHVEVDLRPYQERGVQWLSMLHHYGFGGILADDMGLGKTLQTIAYLSAHLEDGQRVLVLSPS
SLIYNWQDEFKKFAPQLDVAVSYGLKPKRDEIIAEDHQIIITSYASFRQDFDVYKAGQYDYLILDEAQVMKNTQTKIAQY
LRDFSVPHCLALSGTPIENHLLEIWSIFQIVLPGLLPAKKTFLKLTPMEVARYITPFILRRKKDEVLPDLPDLIEITHQS
ELSDSQKAIYLAQLQQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAGDSGKLDSLRDLLSQIKESDHRV
LIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDAFLISLKAGGVGLNLTGADTVILIDLWWNPA
VEMQAISRAHRIGQKQNVEVFRLITRGTIEEKILELQEGKKNLVTTVLDGNESCASMTVEDIKEILGIAIS

Sequences:
NA

Specific function: NA

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA