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The map label for this gene is trcF

Identifier: 55821999

GI number:

Start: 5046

End: 8552

Strand: Direct

Name: trcF

Synonym: str0006

Alternate gene names: NA

Gene position: NA

Preceding gene: 55821998

Following gene: 55822000

Centisome position: NA

GC content: NA

Gene sequence:

>3507_bases
ATGGCTAATACAATCTTAGAGCTTTTTGAGAAGAATCATCAATTGCTTGAGTGGCGTGATAAGGTAAGCTTATTGAGTAG
GCAATTGGTCATGGGATTTTCTGGTTCGAGCAAGGCAGTTGCCATGGCATCTGCCCTTTCTAATCAGGTTCCTAAGATTT
TTATAGTTACCTCAACACAAAATGAAGCTGAGCAATTAGTAGGAGATTTATCAGCTATCTTAGGAGAGGATAAGGTTTAT
TCTTTTTTTGCGGATGATGTATCAGCTGCTGAATTTATCTTTGCTTCACCAGAAAAAACTCATTCTCGTCTTGAAAGTCT
TAACTTTTTAATGGATGAAGAGGCAAGTGGGGTCTTGGTTACAAGTTTAGTTGGTACGAAGTTACATTTGCCTAATCCTA
GGGTTTATAAGGACTCTCGAATCGACTTAGTACTAGGGAAGGAATATGATTTAGATGCTCTCAGTAGGCATCTAACGCAT
ATTGGGTATCAAAGAGTAGAGCAAGTTCTTTCACCTGGTGAGTTTAGTCGTAGGGGGGATATTTTAGATATTTACGAATT
GACTGCAGAGCTTCCCTACCGATTAGAGTTTTTTGGAGATGAGATTGATGGCATTCGTCAGTTTGATAGCGATAGTCAGA
AATCTTTAAACAATTTAGATCATGTTGTCATATCACCGGCGGATGATATTATCTTAACAAGAGAAGATTACCAACGTGCT
GAGAAGGCCCTAGAAAGTGCGGTCTCGAGGTCAGACGGTCTTCATAAGGCTTACCTTGAGGAAGTTCTATCAGTGACGAT
TGATGGTCATCGCCATAAAGATTTACGTAAGTTTTTGTCTCTCTTTTATGACAAAGCTTATACCTTATTTGACTATCTTC
CAAAAGGGACTCCTGTATTCATTGATGATTTTCAAAAGATAGTGGACCGCCATGGACGTCTTGAATTGGAAGTGGCTAAT
CTTTTAACTGAGGATCTTCATCAAGGTAAGTCTCTGAGTCATCTAAACTACTTCGTGGATTCATTTAAGACTTTACGTAA
CTATCAGCCAGCTAGCTTCTTTTCTAATTTCCATAATGGATTAGGAAATCTTAAATTTGATAAGTTGTATCAATTCACAC
AATACCCTATGCAGGAGTTTTTCAACCAATTTCCATTACTGATTGACGAAATTCGTCGTTATACTAAGAATAAGGCAACG
GTTATTTTACAAGTAGGGTCTGATAAGCAACTTAATTCTTTGAAGGAAACCTTGGAAGAGTACAATCTAGATTTACCTCT
TAGTAGCTTTGGAGATTTGATACCTCATAAGGCTCAACTAGTCCTAGGAAACTTATCGAATGGCTTTTACTTTGCAGATG
AAAAGGTTGTTCTGGTTACTGAACGTGAGATTTTTCATAAAAAAGTAAAACGTCGTACGCGTGCTAACCATATTTCTAAT
GCTGAGCGTCTTAAAGACTATAATGAACTTGAAAAAGGTGATTATGTTGTACACCAGACTCATGGTATAGGACAATTTAA
AGGTATTGAGACTATTGAAATTAGAGGGGTACACCGTGACTACTTGACCATTCAATATCAGGATGCTGCAACAATTTCTC
TACCTATTGAGCAGATTGAGAGTCTCTCTAAGTATGTGTCAGTGGACGGGAAAGAGCCTAAAATTAATAAACTCAATGAT
GGTCGTTTCCAAAAGACCAAACAAAAAGTAAGCAAGCAGGTAGAGGATATTGCTGATAATCTCTTAAAACTCTATGCCGA
GCGAAGTCAACTGAAAGGATTTGCTTTTTCACCGGATGATGATAATCAAAGGGATTTTGAAGATGAGTTCTCCTATGCTG
AGACAGTGGATCAACTGCGTTCCATTAAGGAAATTAAGGCGGACATGGAGTCAGACAAACCTATGGATCGTCTCTTGGTT
GGTGATGTTGGTTTTGGTAAGACAGAGGTAGCCATGCGTGCTGCCTTCAAGGCGGTTAATGATGGGAAGCAAGTTGCTAT
CCTAGTTCCTACCACAGTTCTTGCCCATCAGCATTATATGAATTTTAAAGAGCGTTTTGAAAATCATGCTGTTGAAGTAG
ATGAACTCAGTCGTTTTAGAAGTAAAAAAGAGCAAAATGAGACTATTAAAAATCTAGCTAAAGGACGTATTGATATTATT
ATTGGTACCCACCGATTGTTGTCTAAAGATGTTAAGTTTTCTGATTTAGGCTTGCTAGTAATTGATGAAGAACAACGTTT
TGGCGTGAAGCATAAAGAGAAACTTAAGGAGTTGAAAGCTAAAGTTGATGTCCTTACTCTAACTGCGACCCCTATTCCTC
GTACACTTCATATGTCTATGTTGGGTATTCGTGATTTGTCGATTATTGAGACAGCACCTACCAACCGTTATCCAGTTCAA
ACTTATGTTATGGAAACCAATCCTGGTCTTATTCGAGAAGCGATATTAAGGGAGATGGACAGAGGTGGCCAGATTTTTTA
TATTTATAATCGTGTTGAAACCATTGATCAAAAAGTTTCTGAACTGCATGAGCTAGTCCCTGAAGCACGTATCGGATTTG
TTCATGGTCAGATGAGTGAAGTTATGTTGGAGAATACTCTATTAGATTTTTTGAATGGTGATTACGATATTTTGGTAGCA
ACGACCATTATCGAGACAGGCATTGATATCCCCAATGTTAATACACTTCTCATTGAGAATGCAGACCATATGGGCTTGTC
TACCCTTTATCAGCTAAGAGGTCGTGTGGGACGTAGTAATCGAATTGCCTATGCCTACCTTATGTATCATCCTGACAAAG
TGTTGACGGAAGTCTCAGAGAAGCGTTTGGATGCTATTAAGGGATTTACAGAACTGGGATCAGGTTTCAAAATTGCTATG
CGTGATTTATCTATTCGCGGTGCAGGGAATATTCTTGGTGCTTCTCAAAGTGGTTTCATCGACTCAGTCGGATTTGAAAT
GTACTCGCAACTCTTGGAAGAGGCTATCAATAAGCGTCAAGGTAAGACTCAGGTTCGTCAAAAAGGAAATGCAGAGTTCA
ATCTTCAGATTGATGCTTACCTTCCTTCTGACTATATTTCTGACGAGCGCCAAAAAATTGAAATTTATAAGCGTATTCGT
GAAATTGAGAATCAGAAAGACTACCAGGACCTTCAAGATGAGTTGATTGACCGCTTTGGAGAATATCCAGATCAAGTTGC
CTATCTCATTGAGATTGGTCTGGTTAAGGCCTATTTAGATGCTGCCTTTGCAGAATTAGTCGAGCGTAAGAACGATACTA
TCATCGTTCGTTTCGAAAAAGTCTCTCTAAAATTCTTCTTGACACAAGACTATTTTGAAGCCATCTCTAAGACGAATTTA
AAGGCAAGAATTAGTGATAACCAAGGAAAAGTAGAGATTATTTTTGATGTTCGTAACAAGAAAGACTATGAAATCCTTGA
GGAATTAAAGATTTTTGGTCAGACATTTATGGAAATTAAAAAACGTAAAGAAAAAAAAGAAACTTAA

Upstream 100 bases:

>100_bases
GACGATTATGCCATGATTTTACTTACTTTAGACAAGGTAGAGACAGCCCTCCATCACTACTTAAAAACAAATGATTTTGA
AGACACCATGAGGCGGTATA

Downstream 100 bases:

>100_bases
GGAAAGTTTAAGTAAATCTCTATATACTATAAAACATCCTAAAACTTTTCTTTTTCATAAATCTCCTGAGAGGGTCGACT
AGTGTCGATCCTCTTATTTT

Product: transcription repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1168_residues
MANTILELFEKNHQLLEWRDKVSLLSRQLVMGFSGSSKAVAMASALSNQVPKIFIVTSTQNEAEQLVGDLSAILGEDKVY
SFFADDVSAAEFIFASPEKTHSRLESLNFLMDEEASGVLVTSLVGTKLHLPNPRVYKDSRIDLVLGKEYDLDALSRHLTH
IGYQRVEQVLSPGEFSRRGDILDIYELTAELPYRLEFFGDEIDGIRQFDSDSQKSLNNLDHVVISPADDIILTREDYQRA
EKALESAVSRSDGLHKAYLEEVLSVTIDGHRHKDLRKFLSLFYDKAYTLFDYLPKGTPVFIDDFQKIVDRHGRLELEVAN
LLTEDLHQGKSLSHLNYFVDSFKTLRNYQPASFFSNFHNGLGNLKFDKLYQFTQYPMQEFFNQFPLLIDEIRRYTKNKAT
VILQVGSDKQLNSLKETLEEYNLDLPLSSFGDLIPHKAQLVLGNLSNGFYFADEKVVLVTEREIFHKKVKRRTRANHISN
AERLKDYNELEKGDYVVHQTHGIGQFKGIETIEIRGVHRDYLTIQYQDAATISLPIEQIESLSKYVSVDGKEPKINKLND
GRFQKTKQKVSKQVEDIADNLLKLYAERSQLKGFAFSPDDDNQRDFEDEFSYAETVDQLRSIKEIKADMESDKPMDRLLV
GDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAHQHYMNFKERFENHAVEVDELSRFRSKKEQNETIKNLAKGRIDII
IGTHRLLSKDVKFSDLGLLVIDEEQRFGVKHKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSIIETAPTNRYPVQ
TYVMETNPGLIREAILREMDRGGQIFYIYNRVETIDQKVSELHELVPEARIGFVHGQMSEVMLENTLLDFLNGDYDILVA
TTIIETGIDIPNVNTLLIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKVLTEVSEKRLDAIKGFTELGSGFKIAM
RDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAINKRQGKTQVRQKGNAEFNLQIDAYLPSDYISDERQKIEIYKRIR
EIENQKDYQDLQDELIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVERKNDTIIVRFEKVSLKFFLTQDYFEAISKTNL
KARISDNQGKVEIIFDVRNKKDYEILEELKIFGQTFMEIKKRKEKKET

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA