Click here to switch to the map view.

The map label for this gene is xop1

Identifier: 55378744

GI number:

Start: 1818649

End: 1819401

Strand: Reverse

Name: xop1

Synonym: rrnAC2030

Alternate gene names: NA

Gene position: NA

Preceding gene: 55378748

Following gene: 55378743

Centisome position: NA

GC content: NA

Gene sequence:

>753_bases
ATGTTGCCACTCCAGGTGTCAAGTCTCGGTGTAGAGGGCGAAGGAATCTGGCTCGCACTCGGCACGGTCGGGATGTTACT
GGGTATGGTGTACTTCATGGCCAAAGGATGGGACGTTCAGGACCCCGAGCAGGAGGAGTTCTACGTCATCACCATCCTTA
TCGCAGGTATCGCCGCGTCGTCGTACCTGTCGATGTTCTTCGGGTTCGGCCTGACGGAGGTCGAACTCGTCAACGGACGG
GTCATCGACGTATACTGGGCGCGATACGCTGACTGGCTGTTCACGACGCCGCTGTTGTTGCTTGATATCGGCCTCCTGGC
CGGCGCAAGCAACCGCGACATGGCGTCGCTCATCACCATCGACGCCTTCATGATCGTTACCGGCCTCGCCGCGACGCTGA
TGAAGGTGCCTGTGGCCCGGTACGCCTTCTGGACTATCAGCACCATCGCGATGCTGTTCGTCCTGTACTACCTCGTCGTC
GTTGTCGGCGAGGCCGCGAGCGATGCCAGCGAAGAAGCACAGTCGACGTTCAACGTCCTTCGAAACATCATCCTCGTCGC
GTGGGCCATCTACCCCGTCGCGTGGCTTGTTGGGACCGAGGGACTCGGACTCGTCGGCCTGTTCGGCGAAACCCTGCTGT
TCATGATTCTGGACCTGACCGCGAAGATCGGGTTCGGATTCATCCTGCTGCGCAGTCGCGCAATCGTCGGTGGCGACTCC
GCCCCGACGCCGTCCGCTGAAGCCGCTGACTAG

Upstream 100 bases:

>100_bases
GCACAGTACTCAACTGTCCCAGCAAAAGTGATAATTATCGTTCATACACGTATCAATTTGGGGGTGCTGTTTTTTATGTC
CAGCCTTTATTGTTGATGTG

Downstream 100 bases:

>100_bases
CGGACATCCAGCACTCATCGACTTTTTTATACGCCGCACCAACGATACGTACGTTTGATACGCACATGAGTGAGGAGCCA
ACGACGCCGAAGGAACTAAG

Product: bacteriorhodopsin

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>250_residues
MLPLQVSSLGVEGEGIWLALGTVGMLLGMVYFMAKGWDVQDPEQEEFYVITILIAGIAASSYLSMFFGFGLTEVELVNGR
VIDVYWARYADWLFTTPLLLLDIGLLAGASNRDMASLITIDAFMIVTGLAATLMKVPVARYAFWTISTIAMLFVLYYLVV
VVGEAASDASEEAQSTFNVLRNIILVAWAIYPVAWLVGTEGLGLVGLFGETLLFMILDLTAKIGFGFILLRSRAIVGGDS
APTPSAEAAD

Sequences:
NA

Specific function: NA

COG id: COG5524

COG function: function code R; Bacteriorhodopsin

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA