Definition Haloarcula marismortui ATCC 43049 chromosome chromosome I, complete sequence.
Accession NC_006396
Length 3,131,724

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The map label for this gene is ycdH

Identifier: 55377380

GI number:

Start: 440322

End: 441407

Strand: Reverse

Name: ycdH

Synonym: rrnAC0502

Alternate gene names: NA

Gene position: NA

Preceding gene: 55377384

Following gene: 55377379

Centisome position: NA

GC content: NA

Gene sequence:

>1086_bases
ATGGAAACTAACCAACCCTGTGACGATAAGTCGTGTAGGGTCACCCGCAGGCAGGCACTCAGTGCCGGGGCGGGGGTCCT
TGCGTCCGGCTTTGCCGGCTGTCTGACCGGCGGCGGGACGGAAGCGGCAACGAATAGCAGCGACAGCGCCAGTGGTGCGG
ACGGACCGGTCGCGGTTGCGTCGTTTTTCAGTTTCTATGACTTTGCTCGAAAGGTCGCCCGCGGGACGCCGATAACGGTC
AAGAACCTCATCCCGACCGGACTGCACGGCCACGGCTGGGAACCGGACGCTGGGATCACGCGAGATATCATCGACGCGGA
CGCGTTCATTCACGTCGGCCCGGACTTCCAGCCATGGGCCGACCGCGCGATTCAGACCCTCGAAGACGACAACGTCGATA
CCGAACTCATCAACGTCCGTGAGGGTATCGAACTCGAATCGCTCGCGGCGAGTCTCGACCGCGACGAAGAGGGTGTCGGA
CAGAACAGAGCCAGCGACCCCCACTTCTGGCTTGACCCGCAACGCGCGAAACAGTCGGTCAACAATATTACCGAGGGGCT
GGTCGCGCTCGCACCGGACGCCGAAGATACGCTCCGGGACAACGCCGAGACGTACAACGCGGACGTTCTCGACCGCATCG
ACGCGGACTACGCCGATATTTTCGACCGGGCCGACAGGAACGTGGTCCAGCTCGCGGCGCACAACGCCTTCCAGTACATC
GGCTCGCGTTACGGCGTCGAGATGCGCCCGCTCGTGGTCAACCTCGCTGCCAGCGGTGACGTGAAGCCCTCGGACATCAC
CGAAGCGAAAGCGGTCATCGAGGACAATGACATCCGGTACATCGGGGCCGGTGTCTTCGAGACGCGCAAGCCTGCAAAGC
AGCTCCTCGCCGAGACACCGGTCGAAGCCTACTACCCCGTGACGCCGTATGCTGGCGTCCGTGAGGAGTGGGTCGAAAAC
GGCTGGGGGTACGAGGAAATCGCCTACCAAATAAATATGCCGACGTTCGAGGTCGTTCTGGGCAACACGGCACCTGCAGA
CGCGGGCCCCGACGGCTGGAGCGAGAAGTGGCGGAACTTCGAATAA

Upstream 100 bases:

>100_bases
ACCGAGTAGATTTCAGCCACGAGTGACCTGCTTTATTAGATTAGTCTAATACTCTAATTAGAGGAGAACTATTATACCCT
TTCCCGATAGCAAGCAACAC

Downstream 100 bases:

>100_bases
GGATGACCATGCGCTCACACCATCGAGACGATGCCGACGAAGCGACGACCGAATCGAGCGAGAACAGGCCAGCTGTCGTC
GAACTCACGGACGTGTCGTT

Product: adhesion protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>361_residues
METNQPCDDKSCRVTRRQALSAGAGVLASGFAGCLTGGGTEAATNSSDSASGADGPVAVASFFSFYDFARKVARGTPITV
KNLIPTGLHGHGWEPDAGITRDIIDADAFIHVGPDFQPWADRAIQTLEDDNVDTELINVREGIELESLAASLDRDEEGVG
QNRASDPHFWLDPQRAKQSVNNITEGLVALAPDAEDTLRDNAETYNADVLDRIDADYADIFDRADRNVVQLAAHNAFQYI
GSRYGVEMRPLVVNLAASGDVKPSDITEAKAVIEDNDIRYIGAGVFETRKPAKQLLAETPVEAYYPVTPYAGVREEWVEN
GWGYEEIAYQINMPTFEVVLGNTAPADAGPDGWSEKWRNFE

Sequences:
NA

Specific function: NA

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA