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The map label for this gene is yebC [C]

Identifier: 54297204

GI number: 54297204

Start: 1386884

End: 1387627

Strand: Direct

Name: yebC [C]

Synonym: lpp1249

Alternate gene names: 54297204

Gene position: 1386884-1387627 (Clockwise)

Preceding gene: 54297202

Following gene: 54297205

Centisome position: 39.58

GC content: 40.99

Gene sequence:

>744_bases
ATGGCTGGTCATAGTAAATGGGCTAATATCAAATTCCGTAAAGGCGTACAGGATGCCAAAAGAGGGAAAATATTTACTAA
ATTAATTCGTGAAATTACTGTAGCTGCACGTATGGGAGGAGGAGATGAGTCAAGTAATCCACGTTTGAGAGATGCTGTTA
AAAAAGCGCTGAATGCCAATATGAAGCGCGATACCATCGATAATGCTGTCAAGCGAGGGGTAGGGGGGGCTGATGGCGAA
GCAATGATAGCTATGCGTTATGAGGGTTACGGGCCAGGTGGTGTTGCTATATTGGTAGATTGTTTGTCTGACAATAAAAA
TCGAACGGTATCGGAAGTTCGACATGCTTTTTCAAAACATGGGGGTAATTTAGGCACTGATGGTTCAGTATCTTATCTTT
TCACTAATCAAGGTGAAATTCTCATGGCTTCTAATCAGCCAGAAGATAAGGTGATGGAGATTGCAATCGATGCTGGCGCT
TCTGATGTTGCTGTAGAGGACAGTCAGATAGAGATCATTACCCCTGTAGAAGCTTATCACACCGTCTTAAATGCTTTACA
GGATGCCGGTTTGGAGGTAGAGCAGTCTCATTTAACTATGCGTGCACAAACCTTGGTTCCAATTAGTGATGAAACGGCTG
AAAGCTTAATTAAACTGATTGATATGCTGGAAGATTTGGATGATGTCCAAGAAGTTTACAGCAATGCTGAATTTTCTGAA
AAAATATTAGAATCAATGAATTAA

Upstream 100 bases:

>100_bases
AAAAGTTCAAATTGTCGAGAGCATCGATGGCTTTAGTCATTCTTTTTGGTGTTAGAGCATTGTATAATCTCCAAATAAAA
ATTCATTTAGAGGTGATGTA

Downstream 100 bases:

>100_bases
TGACGATTATATTAGGGATAGATCCAGGCTCACGGGTTACAGGATATGGATTGATTAAAGAATCTGACCGTAAAATCGCG
TACATCGATAGCGGTTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN

Sequences:

>Translated_247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN
>Mature_246_residues
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGEA
MIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGAS
DVAVEDSQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSEK
ILESMN

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.5546558704453, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=55.8704453441296, Blast_Score=280, Evalue=5e-77,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=40.343347639485, Blast_Score=157, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.6393442622951, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.710843373494, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1249_LEGPA (Q5X5S1)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_123573.1
- ProteinModelPortal:   Q5X5S1
- SMR:   Q5X5S1
- STRING:   Q5X5S1
- GeneID:   3119166
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp1249
- LegioList:   lpp1249
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   LPNE297246:LPP1249-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26829; Mature: 26697

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC
>Mature Secondary Structure 
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA