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The map label for this gene is flgC [H]

Identifier: 54297180

GI number: 54297180

Start: 1359710

End: 1360132

Strand: Direct

Name: flgC [H]

Synonym: lpp1225

Alternate gene names: 54297180

Gene position: 1359710-1360132 (Clockwise)

Preceding gene: 54297179

Following gene: 54297181

Centisome position: 38.81

GC content: 39.72

Gene sequence:

>423_bases
ATGTCATTAAATGCAATTTTTGACATCGCGGCTTCTGCAATGACCGCAGAAACAGTGCGTTTGACTACCAGTGCTGGCAA
TATGAGTAATGCGAATGTTGAAGCAGGTAGTCCAGATGAGGTCTATCAAGCCAAATATCCTGTTTTCAAGTCAGTCCAGG
AGAATGCAAATCAATGGATTGGGGAGCAAATTAAGGCTGGCGTGAAACTGGATGGTATTTATCAGAGTGATGCAGAACCG
CACAGAAGGTACGATCCAAATAGTCCAATAGCTGATAAAGACGGGTTTGTCTATACGTCAAATATCAATTACGTTGAAGA
AATGGCAAATATCATTTCAGCTTCTCGTTCTTATCAAATGAATATTGAATTACTTAATACAACCAAACAACTTATGCAAA
GGACGCTGCAATTAGGCGAATAA

Upstream 100 bases:

>100_bases
CTACCGAGTTTGCTCGAAATGCATTGAATTATCAGGCCAGCTTGAGTTTCTTAAATGGCAAAATCAAGTCCATGCTGACC
GCATTGAAAGGGGAGTAATC

Downstream 100 bases:

>100_bases
GGGGAAGGGAATGACTACCAATTCAGTAAATGGTTCCAATTCAATAGGTGGTTTAGGTTTGAATCAAATTGATTCAGATA
AAAGACAAAACTTGGGACAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWIGEQIKAGVKLDGIYQSDAEP
HRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQLGE

Sequences:

>Translated_140_residues
MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWIGEQIKAGVKLDGIYQSDAEP
HRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQLGE
>Mature_139_residues
SLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWIGEQIKAGVKLDGIYQSDAEPH
RRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQLGE

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=140, Percent_Identity=43.5714285714286, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15516; Mature: 15385

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWI
CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
GEQIKAGVKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQM
HHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEE
NIELLNTTKQLMQRTLQLGE
EEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWI
CCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
GEQIKAGVKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQM
HHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEE
NIELLNTTKQLMQRTLQLGE
EEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA