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The map label for this gene is udk [H]

Identifier: 54297122

GI number: 54297122

Start: 1298353

End: 1299069

Strand: Direct

Name: udk [H]

Synonym: lpp1167

Alternate gene names: 54297122

Gene position: 1298353-1299069 (Clockwise)

Preceding gene: 54297121

Following gene: 54297124

Centisome position: 37.06

GC content: 33.75

Gene sequence:

>717_bases
ATGCCTTTTTTGACTGCAAGAGAATATTACGTGTCTAAATTTATCTTTGTCATTGGAGGAACTGGAACTGGAAAAACGAC
TGTTTCAGAAGAAATTAAGACAATAGCAGAAGCACAAAATTTCACGGTTACGATATTAAGTCTGGATCATTATTACTTGC
CCCAAAGTATGATGGATCCGGACAAACCAAAGAATTTTGATGTCCCTGAAGCTCTGGAACAAACATTAATTCAGCAGCAT
TTGCAGGATTTAGAGGCTGGTAAAACCATATTCAGACCGACCTATGATATGGCAAGCAGTGACAGGGTATTGAATGGGGA
AATGAAAATTATTCCTGCTGATATCATTATTGTCGAAGGAATTTTTGCTGGTGAGTATTTATCCTCTTTAAGGAATCAAA
CAGAAAAACTCAAAATTTATTTACAATCCAATCAAATAAATGACAATTACACAAGGAAGGAAGACAGAGATATAGTTGAA
AGAAAAAGATCATCAGCTCATGCCCATGTTGCGAAAAAGAATCAAATGACAGGATTTTTTAGATATGTCGCTACCCATAT
GATTTCTTCAAATATGGTCATTGATAATCCTTGGCTTCCTCAACAAAACATGACTACTACCGAAAAACTTCCTTTGATTG
CAGGCAATAACTTAATAAAATTAAATGAATTTTTATCTTCAACTGAGAGTCATTTTTTATATAAAACATATAGTTAA

Upstream 100 bases:

>100_bases
ATGGTTTGCTTTGTAAGCTTTGGAGTACTGGATTTGGCTCGAGAGCTTATCAAGGTACAGATTGATAGGTTCTCTTGTAA
TTTGTTCCTCAGTTATTATA

Downstream 100 bases:

>100_bases
AATGTAACTTATTGCCCCAGTAGATAATTTAGGGGCAATATAAAATGCAATATTTAAAATTGAGTTAAAAGCTCAGTGAT
TCCTTGTTAGGATTACAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MPFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQH
LQDLEAGKTIFRPTYDMASSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVE
RKRSSAHAHVAKKNQMTGFFRYVATHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS

Sequences:

>Translated_238_residues
MPFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQH
LQDLEAGKTIFRPTYDMASSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVE
RKRSSAHAHVAKKNQMTGFFRYVATHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
>Mature_237_residues
PFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQHL
QDLEAGKTIFRPTYDMASSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVER
KRSSAHAHVAKKNQMTGFFRYVATHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 27245; Mature: 27114

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYLPQSMMDP
CCCCCHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
DKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMASSDRVLNGEMKIIPADIIIVEG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCEEEEEEEEEEEEC
IFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAHAHVAKKNQMTGFF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVATHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
HHHHHHHHHCCEEECCCCCCCCCCCHHHCCCEEECCCEEEHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
PFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYLPQSMMDP
CCCCHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
DKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMASSDRVLNGEMKIIPADIIIVEG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCEEEEEEEEEEEEC
IFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAHAHVAKKNQMTGFF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVATHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
HHHHHHHHHCCEEECCCCCCCCCCCHHHCCCEEECCCEEEHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA