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The map label for this gene is yoqW [H]

Identifier: 54296997

GI number: 54296997

Start: 1164101

End: 1164769

Strand: Direct

Name: yoqW [H]

Synonym: lpp1038

Alternate gene names: 54296997

Gene position: 1164101-1164769 (Clockwise)

Preceding gene: 54296996

Following gene: 54296998

Centisome position: 33.23

GC content: 40.66

Gene sequence:

>669_bases
ATGTGCGGTCGATTTGCTTATATTGCTTCTTATGACAAGCTAAAATACCAATTTCATCTAGCCAATGCGATTGAAATTCC
TCCGCGCTTTAATATTTCTCCAGGAGCTGATGTAGTATGTCTTGTTGAAACCGTTGGTCATGAAATTCAATGCGTATTAT
TGCGTTGGGGATTGATTCCTTCCTGGACAACGGACAGAAAAAAATTAGGAAATCTCATCAATGCACGCGCCGAAACAGTT
TTTGAAAAGCCGACTTTTCGTCAGGCAATAAAATCGAAACGCTGTTTAATCCCTATGAGTGGCTTTTATGAATGGCACCA
AGAGGATGGTGTAAAACAGCCTTATTTTTTTCAAAAAAAGAATCATGATTTGCTGGCTGTTGCTGCTATTCGAGATACCT
GGCAGCAGAACGAAGAGGTGATTCATTCCTGTTGCCTGATTACTACGGATGCTAATGCATGGATGCAACCAGTGCACAAT
CGTATGCCGGTGATTTTAGGTGAAGAGGCTCAAGCCATTTGGCTTAACAACACGCAATGTGATAAAGCACAATTAATGGC
GTTAATGAAACCTTATCCTTATGAGGATTTGGAAGGGTATCGAGTGACTAATTTAGTGAACAAAGCCAATTTTGACCATC
CCTTGGCGATGGAGCCATTATCTGAATAA

Upstream 100 bases:

>100_bases
ACAAGTTAATCGGATGATTCATCCTTTACCAAAGTGTGTTTCGTTAATGGGCAAATAAATATGAAGCAGTGCTACACTTA
AAAAAACAGCTGAGAATGAT

Downstream 100 bases:

>100_bases
AAAAATTTAAAAATAATTTTCCTAATATTCTCGAAGGCTTAGTGTGGTTTTCATTTCCAGTTGTTCTGAGATGGGATTTA
CAGTTTATTTTTCCTTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MCGRFAYIASYDKLKYQFHLANAIEIPPRFNISPGADVVCLVETVGHEIQCVLLRWGLIPSWTTDRKKLGNLINARAETV
FEKPTFRQAIKSKRCLIPMSGFYEWHQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQNEEVIHSCCLITTDANAWMQPVHN
RMPVILGEEAQAIWLNNTQCDKAQLMALMKPYPYEDLEGYRVTNLVNKANFDHPLAMEPLSE

Sequences:

>Translated_222_residues
MCGRFAYIASYDKLKYQFHLANAIEIPPRFNISPGADVVCLVETVGHEIQCVLLRWGLIPSWTTDRKKLGNLINARAETV
FEKPTFRQAIKSKRCLIPMSGFYEWHQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQNEEVIHSCCLITTDANAWMQPVHN
RMPVILGEEAQAIWLNNTQCDKAQLMALMKPYPYEDLEGYRVTNLVNKANFDHPLAMEPLSE
>Mature_222_residues
MCGRFAYIASYDKLKYQFHLANAIEIPPRFNISPGADVVCLVETVGHEIQCVLLRWGLIPSWTTDRKKLGNLINARAETV
FEKPTFRQAIKSKRCLIPMSGFYEWHQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQNEEVIHSCCLITTDANAWMQPVHN
RMPVILGEEAQAIWLNNTQCDKAQLMALMKPYPYEDLEGYRVTNLVNKANFDHPLAMEPLSE

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=233, Percent_Identity=30.4721030042918, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI54607104, Length=233, Percent_Identity=30.4721030042918, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI48994894, Length=190, Percent_Identity=30, Blast_Score=79, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323761, Length=198, Percent_Identity=30.3030303030303, Blast_Score=87, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355761, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25586; Mature: 25586

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFAYIASYDKLKYQFHLANAIEIPPRFNISPGADVVCLVETVGHEIQCVLLRWGLIP
CCCCEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
SWTTDRKKLGNLINARAETVFEKPTFRQAIKSKRCLIPMSGFYEWHQEDGVKQPYFFQKK
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCEEEECC
NHDLLAVAAIRDTWQQNEEVIHSCCLITTDANAWMQPVHNRMPVILGEEAQAIWLNNTQC
CCCEEEEHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCC
DKAQLMALMKPYPYEDLEGYRVTNLVNKANFDHPLAMEPLSE
CHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGRFAYIASYDKLKYQFHLANAIEIPPRFNISPGADVVCLVETVGHEIQCVLLRWGLIP
CCCCEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
SWTTDRKKLGNLINARAETVFEKPTFRQAIKSKRCLIPMSGFYEWHQEDGVKQPYFFQKK
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCEEEECC
NHDLLAVAAIRDTWQQNEEVIHSCCLITTDANAWMQPVHNRMPVILGEEAQAIWLNNTQC
CCCEEEEHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCC
DKAQLMALMKPYPYEDLEGYRVTNLVNKANFDHPLAMEPLSE
CHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]