Click here to switch to the map view.

The map label for this gene is yrbA [C]

Identifier: 54296867

GI number: 54296867

Start: 1015554

End: 1015799

Strand: Direct

Name: yrbA [C]

Synonym: lpp0908

Alternate gene names: 54296867

Gene position: 1015554-1015799 (Clockwise)

Preceding gene: 54296866

Following gene: 54296868

Centisome position: 28.99

GC content: 35.77

Gene sequence:

>246_bases
ATGTTAAGTAATGAAGAAATTGAACAAAGACTTAATGAAATTGACGATGTATTTTATGTCAAGGTAGAAGGCGATGGTTA
TCAATATCAGGTAACTGTAGTGACCGATATATTTCTTAAGAAGTCTAAAGTAGCAAGACAGCAATGGGTTTATGCCCAGC
TTAAAGACTTTATTACCACCGGAAGGCTTCATGCTATCAGTATGAAGACATGGACAAAAGAAGAATGGGGGAAGCAAAAT
GGATAA

Upstream 100 bases:

>100_bases
TAAACACGGATTTTTTTGATGATGATTCAGTCATGTCCATTATTTTTTATCAATAAAAGTATAAAAAATTTGTATTTATT
TTAATTAGTGAGCTAAGTTT

Downstream 100 bases:

>100_bases
ATTATTGATTAATGGTGGTAAAGCATTACATGGTGAAGTGGTCATTTCGGGAGCAAAAAACGCTGCTCTTCCAATCATGG
CTGCCAGTCTATTAGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLSNEEIEQRLNEIDDVFYVKVEGDGYQYQVTVVTDIFLKKSKVARQQWVYAQLKDFITTGRLHAISMKTWTKEEWGKQN
G

Sequences:

>Translated_81_residues
MLSNEEIEQRLNEIDDVFYVKVEGDGYQYQVTVVTDIFLKKSKVARQQWVYAQLKDFITTGRLHAISMKTWTKEEWGKQN
G
>Mature_81_residues
MLSNEEIEQRLNEIDDVFYVKVEGDGYQYQVTVVTDIFLKKSKVARQQWVYAQLKDFITTGRLHAISMKTWTKEEWGKQN
G

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082226, Length=77, Percent_Identity=37.6623376623377, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9574; Mature: 9574

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNEEIEQRLNEIDDVFYVKVEGDGYQYQVTVVTDIFLKKSKVARQQWVYAQLKDFITT
CCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
GRLHAISMKTWTKEEWGKQNG
CCEEEEEECCCCCHHCCCCCC
>Mature Secondary Structure
MLSNEEIEQRLNEIDDVFYVKVEGDGYQYQVTVVTDIFLKKSKVARQQWVYAQLKDFITT
CCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
GRLHAISMKTWTKEEWGKQNG
CCEEEEEECCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA