| Definition | Legionella pneumophila str. Paris, complete genome. |
|---|---|
| Accession | NC_006368 |
| Length | 3,503,610 |
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The map label for this gene is ppsA [H]
Identifier: 54296826
GI number: 54296826
Start: 974558
End: 976945
Strand: Direct
Name: ppsA [H]
Synonym: lpp0867
Alternate gene names: 54296826
Gene position: 974558-976945 (Clockwise)
Preceding gene: 54296823
Following gene: 54296827
Centisome position: 27.82
GC content: 41.25
Gene sequence:
>2388_bases ATGACTGTTAAAAGACATACTATAGATTTGGCACATCTTGGCATGCGCGATTTGGATCAGGTCGGTGGTAAGAACTCTTC TCTTGGTGAAATGATTAGTCATTTGTCATCAGCAGGCGTTTCTGTGCCGGGAGGATTTGCTACAACTGCTGATTCTTTCA GAGAATTTTTGTCCCAAAACGATCTTGATAAGAAAATTTATGATAAGTTGACTGCTCTCGATACGGATGATGTCTGCCAA CTGGCAGTGGTAGGGAAACAAATTAGGGAAATGATTATTGATACGCCATTCACCCCGGAGTTTGAACAGTCGGTTCGCTC TTCCTACCAGAAACTTGCTCAAGAGATTGGGCATGATAATTTTAGTGTTGCAGTAAGATCTTCTGCTACTGCTGAAGATT TGCCTGATGCTTCTTTTGCCGGTCAGCAGGAAACTTTTTTAAATGTGAAGGGAGAAGAGGCGGTATTGGCTGCCATTAAA CAGGTATATGCTTCTTTATTTAATGACAGGGCAATAGCTTATCGTGTGCATCATAATTTTGCTCATAACGAAGTGGCATT GTCTGCTGGCATTCAGCAAATGATTCGTAGTGATTTGGCAGTCAGTGGTGTCATGTTTACTATGGATACTGAATCCGGTT TTGATCAAGTAGTATTTATCACTTCCTCTTATGGTTTAGGTGAAATGGTTGTTCAAGGCGCTGTAAATCCAGATGAATTT TATGTCCATAAACCATGCCTTGAAGCCGGAAAACCGGCGATTATCCGTCGAAACCTGGGCAGCAAGGCGTTAAAGATGGT TTATTGCGATGACCCTTCCCTTGAAAGACGTGTTAAAACAGTCGATGTAGACCCTGCTGAAAGATTATTGTTTTCCTTAT CCAAAGAGGAAGTAGAGCAATTAGCGAATCAGGCACTTATTATTGAAAAACATTATGGTCGTCCCATGGATATTGAATGG GCGAAAGACGGGGTCAATGGTAAACTGTATATCCTGCAAGCTCGTCCGGAGACTGTAAAAAGCAGGGATAACAAACAAGT GCTCGAACGGTATACTTTGCAAAAAAGAGGCGACGTATTGGCTGAAGGCCGTAGTATAGGTCAAAGAATCGGTCAGGGTA AAGCAAAGGTTATTAAAGATATTAATGAAATGCACAGGGTTCAACCCGGCGATGTTTTGATATCCGATATGACCGATCCT GATTGGGAACCTGTCATGAAGCGTGCTTCTGCAATCGTTACCAATCGTGGAGGCAGAACTTGTCATGCAGCTATTATTGC TCGTGAATTGGGGATTCCTGCAGTTGTTGGGTGTGGTGATGCAACAAAAACGATTAAAGATGGTGATGTGGTGACTGTAA GCTGTGCGGAAGGCGATACAGGTTTTGTCTATTCTGGTCTGTTGCCTTACGAGCAAGAGCGTCTTGATGTAGAAACCATG CCCGAATTACCCATGAAAGTGATGTTGAATGTTGGAAACCCTGAAAGAGCCTTCGCATTTCAATCAATACCTAATTCCGG AGTGGGATTGGCCCGTCTTGAATTTTTGATTTCCAACACGATAGGTATTCATCCTAAAGCGCTTCTGGAATTTGATACTT TAAAGGATGAGGAACTTAAGCGGTACATTAAAGAAAAGACCATAGCGTATGATTCACCTGTAGAATATTACATTGAAAGA TTAAAAGAAGGCATAGCGACTATTGCTGCTGCTTTTTATCCCAAACCCGTTATAGTCAGGCTTTCAGATTTTAAATCGAA TGAATACGCTAATCTGGTTGGTGGCTCATTGTATGAACCCCAAGAAGAAAATCCTATGCTTGGTTTTCGTGGCGCCTCTC GTTATGTTTCTTCAAATTTTTCTGAGTGCTTTGCTCTTGAATGTAAAGCAGTAAGACGAGTCAGGGAGGAGATGGGTTTA GATAATGTTGAGGTCATGATTCCTTTTGTCCGAACAGTTTCTGAAGCTGGTAATGTCATCGAAGTATTAAAAAAGCATGG TCTGGAAAGAGGAAAATGTGGGTTAAGAGTGATTATGATGTGCGAGTTACCTTCCAATGCCTTGTTAGCCAGTGAATTTT TGCAGTATTTTGATGGTTTTTCCATAGGATCGAATGATTTAACTCAATTGACTTTAGGATTAGACAGGGATTCAGGTTTG GTGGCTTCACAATTTGATGAGCGCAACGATGCTGTGAAAGCTTTATTGCATATGGCTATTTCAGCTTGTAAAAAAGAAGG CAAGTATATAGGTATTTGCGGTCAAGGTCCTTCAGATCACCAGGATTTTGCCCAATGGCTGATGAAGGAAGGAATTGAGA GTGTTTCTCTAAACCCTGACTCTGTTTTACAAACATGTTTGTTTTTAGCTAAACAATCGATGAATTGA
Upstream 100 bases:
>100_bases TATTTTGACCTTTATAAAAATGAAATACAGCACAAGTTCTAATTCCAATAAAGTAACAATTTAAGTAGAATGTTTACTAT TTTATGAATTTGGGGCGGTT
Downstream 100 bases:
>100_bases TGAACCAGAGTGTGCTGGCAATTCAGTTTGAAATTGTTAGGCTGTTGGTGCATTAGGAATTTACTGAGGCATTCCTATGA TTTTGAAATGCAGCAGATTG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MTVKRHTIDLAHLGMRDLDQVGGKNSSLGEMISHLSSAGVSVPGGFATTADSFREFLSQNDLDKKIYDKLTALDTDDVCQ LAVVGKQIREMIIDTPFTPEFEQSVRSSYQKLAQEIGHDNFSVAVRSSATAEDLPDASFAGQQETFLNVKGEEAVLAAIK QVYASLFNDRAIAYRVHHNFAHNEVALSAGIQQMIRSDLAVSGVMFTMDTESGFDQVVFITSSYGLGEMVVQGAVNPDEF YVHKPCLEAGKPAIIRRNLGSKALKMVYCDDPSLERRVKTVDVDPAERLLFSLSKEEVEQLANQALIIEKHYGRPMDIEW AKDGVNGKLYILQARPETVKSRDNKQVLERYTLQKRGDVLAEGRSIGQRIGQGKAKVIKDINEMHRVQPGDVLISDMTDP DWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATKTIKDGDVVTVSCAEGDTGFVYSGLLPYEQERLDVETM PELPMKVMLNVGNPERAFAFQSIPNSGVGLARLEFLISNTIGIHPKALLEFDTLKDEELKRYIKEKTIAYDSPVEYYIER LKEGIATIAAAFYPKPVIVRLSDFKSNEYANLVGGSLYEPQEENPMLGFRGASRYVSSNFSECFALECKAVRRVREEMGL DNVEVMIPFVRTVSEAGNVIEVLKKHGLERGKCGLRVIMMCELPSNALLASEFLQYFDGFSIGSNDLTQLTLGLDRDSGL VASQFDERNDAVKALLHMAISACKKEGKYIGICGQGPSDHQDFAQWLMKEGIESVSLNPDSVLQTCLFLAKQSMN
Sequences:
>Translated_795_residues MTVKRHTIDLAHLGMRDLDQVGGKNSSLGEMISHLSSAGVSVPGGFATTADSFREFLSQNDLDKKIYDKLTALDTDDVCQ LAVVGKQIREMIIDTPFTPEFEQSVRSSYQKLAQEIGHDNFSVAVRSSATAEDLPDASFAGQQETFLNVKGEEAVLAAIK QVYASLFNDRAIAYRVHHNFAHNEVALSAGIQQMIRSDLAVSGVMFTMDTESGFDQVVFITSSYGLGEMVVQGAVNPDEF YVHKPCLEAGKPAIIRRNLGSKALKMVYCDDPSLERRVKTVDVDPAERLLFSLSKEEVEQLANQALIIEKHYGRPMDIEW AKDGVNGKLYILQARPETVKSRDNKQVLERYTLQKRGDVLAEGRSIGQRIGQGKAKVIKDINEMHRVQPGDVLISDMTDP DWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATKTIKDGDVVTVSCAEGDTGFVYSGLLPYEQERLDVETM PELPMKVMLNVGNPERAFAFQSIPNSGVGLARLEFLISNTIGIHPKALLEFDTLKDEELKRYIKEKTIAYDSPVEYYIER LKEGIATIAAAFYPKPVIVRLSDFKSNEYANLVGGSLYEPQEENPMLGFRGASRYVSSNFSECFALECKAVRRVREEMGL DNVEVMIPFVRTVSEAGNVIEVLKKHGLERGKCGLRVIMMCELPSNALLASEFLQYFDGFSIGSNDLTQLTLGLDRDSGL VASQFDERNDAVKALLHMAISACKKEGKYIGICGQGPSDHQDFAQWLMKEGIESVSLNPDSVLQTCLFLAKQSMN >Mature_794_residues TVKRHTIDLAHLGMRDLDQVGGKNSSLGEMISHLSSAGVSVPGGFATTADSFREFLSQNDLDKKIYDKLTALDTDDVCQL AVVGKQIREMIIDTPFTPEFEQSVRSSYQKLAQEIGHDNFSVAVRSSATAEDLPDASFAGQQETFLNVKGEEAVLAAIKQ VYASLFNDRAIAYRVHHNFAHNEVALSAGIQQMIRSDLAVSGVMFTMDTESGFDQVVFITSSYGLGEMVVQGAVNPDEFY VHKPCLEAGKPAIIRRNLGSKALKMVYCDDPSLERRVKTVDVDPAERLLFSLSKEEVEQLANQALIIEKHYGRPMDIEWA KDGVNGKLYILQARPETVKSRDNKQVLERYTLQKRGDVLAEGRSIGQRIGQGKAKVIKDINEMHRVQPGDVLISDMTDPD WEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATKTIKDGDVVTVSCAEGDTGFVYSGLLPYEQERLDVETMP ELPMKVMLNVGNPERAFAFQSIPNSGVGLARLEFLISNTIGIHPKALLEFDTLKDEELKRYIKEKTIAYDSPVEYYIERL KEGIATIAAAFYPKPVIVRLSDFKSNEYANLVGGSLYEPQEENPMLGFRGASRYVSSNFSECFALECKAVRRVREEMGLD NVEVMIPFVRTVSEAGNVIEVLKKHGLERGKCGLRVIMMCELPSNALLASEFLQYFDGFSIGSNDLTQLTLGLDRDSGLV ASQFDERNDAVKALLHMAISACKKEGKYIGICGQGPSDHQDFAQWLMKEGIESVSLNPDSVLQTCLFLAKQSMN
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=780, Percent_Identity=68.8461538461538, Blast_Score=1137, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=462, Percent_Identity=25.3246753246753, Blast_Score=123, Evalue=6e-29, Organism=Escherichia coli, GI1788726, Length=190, Percent_Identity=31.0526315789474, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1789193, Length=413, Percent_Identity=25.4237288135593, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI48994992, Length=402, Percent_Identity=24.3781094527363, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17564524, Length=333, Percent_Identity=26.1261261261261, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87827; Mature: 87696
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKRHTIDLAHLGMRDLDQVGGKNSSLGEMISHLSSAGVSVPGGFATTADSFREFLSQN CCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DLDKKIYDKLTALDTDDVCQLAVVGKQIREMIIDTPFTPEFEQSVRSSYQKLAQEIGHDN CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC FSVAVRSSATAEDLPDASFAGQQETFLNVKGEEAVLAAIKQVYASLFNDRAIAYRVHHNF EEEEEECCCCHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC AHNEVALSAGIQQMIRSDLAVSGVMFTMDTESGFDQVVFITSSYGLGEMVVQGAVNPDEF CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCE YVHKPCLEAGKPAIIRRNLGSKALKMVYCDDPSLERRVKTVDVDPAERLLFSLSKEEVEQ EEECCHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHEECCCCHHHHHHHHCCHHHHHH LANQALIIEKHYGRPMDIEWAKDGVNGKLYILQARPETVKSRDNKQVLERYTLQKRGDVL HHCCEEEEEECCCCCCCCCHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCHH AEGRSIGQRIGQGKAKVIKDINEMHRVQPGDVLISDMTDPDWEPVMKRASAIVTNRGGRT HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH CHAAIIARELGIPAVVGCGDATKTIKDGDVVTVSCAEGDTGFVYSGLLPYEQERLDVETM HHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHCCHHHC PELPMKVMLNVGNPERAFAFQSIPNSGVGLARLEFLISNTIGIHPKALLEFDTLKDEELK CCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH RYIKEKTIAYDSPVEYYIERLKEGIATIAAAFYPKPVIVRLSDFKSNEYANLVGGSLYEP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCC QEENPMLGFRGASRYVSSNFSECFALECKAVRRVREEMGLDNVEVMIPFVRTVSEAGNVI CCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EVLKKHGLERGKCGLRVIMMCELPSNALLASEFLQYFDGFSIGSNDLTQLTLGLDRDSGL HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC VASQFDERNDAVKALLHMAISACKKEGKYIGICGQGPSDHQDFAQWLMKEGIESVSLNPD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHH SVLQTCLFLAKQSMN HHHHHHHHHHHHCCC >Mature Secondary Structure TVKRHTIDLAHLGMRDLDQVGGKNSSLGEMISHLSSAGVSVPGGFATTADSFREFLSQN CCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DLDKKIYDKLTALDTDDVCQLAVVGKQIREMIIDTPFTPEFEQSVRSSYQKLAQEIGHDN CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC FSVAVRSSATAEDLPDASFAGQQETFLNVKGEEAVLAAIKQVYASLFNDRAIAYRVHHNF EEEEEECCCCHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC AHNEVALSAGIQQMIRSDLAVSGVMFTMDTESGFDQVVFITSSYGLGEMVVQGAVNPDEF CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCE YVHKPCLEAGKPAIIRRNLGSKALKMVYCDDPSLERRVKTVDVDPAERLLFSLSKEEVEQ EEECCHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHEECCCCHHHHHHHHCCHHHHHH LANQALIIEKHYGRPMDIEWAKDGVNGKLYILQARPETVKSRDNKQVLERYTLQKRGDVL HHCCEEEEEECCCCCCCCCHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCHH AEGRSIGQRIGQGKAKVIKDINEMHRVQPGDVLISDMTDPDWEPVMKRASAIVTNRGGRT HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH CHAAIIARELGIPAVVGCGDATKTIKDGDVVTVSCAEGDTGFVYSGLLPYEQERLDVETM HHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHCCHHHC PELPMKVMLNVGNPERAFAFQSIPNSGVGLARLEFLISNTIGIHPKALLEFDTLKDEELK CCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH RYIKEKTIAYDSPVEYYIERLKEGIATIAAAFYPKPVIVRLSDFKSNEYANLVGGSLYEP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCC QEENPMLGFRGASRYVSSNFSECFALECKAVRRVREEMGLDNVEVMIPFVRTVSEAGNVI CCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EVLKKHGLERGKCGLRVIMMCELPSNALLASEFLQYFDGFSIGSNDLTQLTLGLDRDSGL HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC VASQFDERNDAVKALLHMAISACKKEGKYIGICGQGPSDHQDFAQWLMKEGIESVSLNPD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHH SVLQTCLFLAKQSMN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]