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The map label for this gene is yidD [C]

Identifier: 54295840

GI number: 54295840

Start: 3344438

End: 3344683

Strand: Reverse

Name: yidD [C]

Synonym: lpl2931

Alternate gene names: 54295840

Gene position: 3344683-3344438 (Counterclockwise)

Preceding gene: 54295841

Following gene: 54295839

Centisome position: 99.97

GC content: 36.59

Gene sequence:

>246_bases
ATGGGAAAAATTAACCTCATGCTACGGCAAATAGTTTGCTTACCAATAAAAATGTATCAGTATTTTATTAGCCCTTTGAT
AACACCATGTTGTCGCTATTATCCGAGTTGTTCAGAGTATGCTGACAGTGCGATCAAACATTATGGCGTAATTAAAGGTT
TATTGATGGCACTTAACAGATTGTCTCGTTGCCATCCATGGTCAAAAGGTGGCTATGATCCTTTATTTCCTAACGATAAG
AATTGA

Upstream 100 bases:

>100_bases
TTCGTCATACTAACTTGCCTGCTGTAGATATAATCATTTTGGCAAGACCAGGTCTAGCAAAGAAAACCAATTTAGGTATA
AATACTAAATTAAATAAAAC

Downstream 100 bases:

>100_bases
GAATATTTAATGGATATACGACGTATAGTTTTATATATGGCGCTTGCGCTTATTGGTTTATCACTTTGGAACGCTTGGCA
AATTGATTATCCAGCCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MGKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHPWSKGGYDPLFPNDK
N

Sequences:

>Translated_81_residues
MGKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHPWSKGGYDPLFPNDK
N
>Mature_80_residues
GKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHPWSKGGYDPLFPNDKN

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=63, Percent_Identity=46.031746031746, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2931_LEGPL (Q5WSE8)

Other databases:

- EMBL:   CR628337
- RefSeq:   YP_128255.1
- STRING:   Q5WSE8
- GeneID:   3114333
- GenomeReviews:   CR628337_GR
- KEGG:   lpf:lpl2931
- NMPDR:   fig|297245.3.peg.1397
- LegioList:   lpl2931
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   LKRISKC
- ProtClustDB:   PRK14380
- BioCyc:   LPNE297245:LPL2931-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9347; Mature: 9216

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSRCHPWSKGGYDPLFPNDKN
HHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSRCHPWSKGGYDPLFPNDKN
HHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA