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The map label for this gene is yraP [C]

Identifier: 54295830

GI number: 54295830

Start: 3330301

End: 3330873

Strand: Reverse

Name: yraP [C]

Synonym: lpl2920

Alternate gene names: 54295830

Gene position: 3330873-3330301 (Counterclockwise)

Preceding gene: 54295831

Following gene: 54295829

Centisome position: 99.56

GC content: 42.23

Gene sequence:

>573_bases
ATGAACATAAATCTAAAATGTAAATCCATCATAGTGATGATGATTGGTGCTTTACTGACTGGTTGCGTTGCTGTGGTTGT
TGCAGGTGCTGCAGCGGGAATGGTTTATGATAGAAGAAGCGTAACTACCATGGAGGCGGACGCCCGATTATTTCATGTGA
TTCATAAAACCATCATCAAGGACCCTCGATTTCGGCACTCCAGAATTCTTGTTTCCAGTTTTAACCGGGTGGTATTGCTG
GTTGGACAAACTCCCGCCGCATCATTACGCGTTCTAGCAGAGCGGATTGCCCAAAATGCTCCTGGAGTTAAAAGAGTGTA
TGATGAAATAACCGTTGATAATCCCATTCCCTTAACTCAACGGACAAAAGACAGTTGGATTACAAGTCAAGTGAGAAGTA
ACATGTTGACTAAAAAGGGACTTGAATCGGGTTCAATACGGATAGTCACTGAAAATGGAGTAGTCTATTTGATGGGAATT
GTTTCTGACGAGCAAGCATTGTTAGCTGTTGATGTGGCAAGACGTGTTGCTGGAGTGAGAAAAGTCGTGAAAATATTCCA
ATATATACGTTAG

Upstream 100 bases:

>100_bases
TGACAGTACTGCATTGATAAGAGAGCTGCACTTGTTCATATTGCATTGTTTTTGTGATTTAATCGAACAATCTTTATTTG
GCCAAGTTTTAGGATAAAAA

Downstream 100 bases:

>100_bases
CATGTTTAAACACGGATGTTTTATACTAATAGTCTTTTTTTTAGCCAGCTGCTTGTCAGGCTGTCTGGGGGCTTTATGGA
CTGGGGCAACTCTAGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNINLKCKSIIVMMIGALLTGCVAVVVAGAAAGMVYDRRSVTTMEADARLFHVIHKTIIKDPRFRHSRILVSSFNRVVLL
VGQTPAASLRVLAERIAQNAPGVKRVYDEITVDNPIPLTQRTKDSWITSQVRSNMLTKKGLESGSIRIVTENGVVYLMGI
VSDEQALLAVDVARRVAGVRKVVKIFQYIR

Sequences:

>Translated_190_residues
MNINLKCKSIIVMMIGALLTGCVAVVVAGAAAGMVYDRRSVTTMEADARLFHVIHKTIIKDPRFRHSRILVSSFNRVVLL
VGQTPAASLRVLAERIAQNAPGVKRVYDEITVDNPIPLTQRTKDSWITSQVRSNMLTKKGLESGSIRIVTENGVVYLMGI
VSDEQALLAVDVARRVAGVRKVVKIFQYIR
>Mature_190_residues
MNINLKCKSIIVMMIGALLTGCVAVVVAGAAAGMVYDRRSVTTMEADARLFHVIHKTIIKDPRFRHSRILVSSFNRVVLL
VGQTPAASLRVLAERIAQNAPGVKRVYDEITVDNPIPLTQRTKDSWITSQVRSNMLTKKGLESGSIRIVTENGVVYLMGI
VSDEQALLAVDVARRVAGVRKVVKIFQYIR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=191, Percent_Identity=40.3141361256544, Blast_Score=123, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20958; Mature: 20958

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINLKCKSIIVMMIGALLTGCVAVVVAGAAAGMVYDRRSVTTMEADARLFHVIHKTIIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHC
DPRFRHSRILVSSFNRVVLLVGQTPAASLRVLAERIAQNAPGVKRVYDEITVDNPIPLTQ
CCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
RTKDSWITSQVRSNMLTKKGLESGSIRIVTENGVVYLMGIVSDEQALLAVDVARRVAGVR
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHH
KVVKIFQYIR
HHHHHHHHHC
>Mature Secondary Structure
MNINLKCKSIIVMMIGALLTGCVAVVVAGAAAGMVYDRRSVTTMEADARLFHVIHKTIIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHC
DPRFRHSRILVSSFNRVVLLVGQTPAASLRVLAERIAQNAPGVKRVYDEITVDNPIPLTQ
CCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
RTKDSWITSQVRSNMLTKKGLESGSIRIVTENGVVYLMGIVSDEQALLAVDVARRVAGVR
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHH
KVVKIFQYIR
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]