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The map label for this gene is 54295810

Identifier: 54295810

GI number: 54295810

Start: 3306650

End: 3307432

Strand: Reverse

Name: 54295810

Synonym: lpl2900

Alternate gene names: NA

Gene position: 3307432-3306650 (Counterclockwise)

Preceding gene: 54295813

Following gene: 54295809

Centisome position: 98.86

GC content: 35.89

Gene sequence:

>783_bases
TTGCTACTCAAATGCATAGAAAAAATAGTTGATGGGTATTTCGCTGTAATTCCCAGGCACACACCGGAATTCGAAAATAT
CAACGGTGCGTTAATAATCGCGCATAGAGGAGCTCATAATAATGCAAGAGGGATAATTGAAAACACTCTGGAAGCATTTC
AGAACGCAAAAGAGACCGGATGTTGGGGAATTGAACTGGATGTACATCTTACTAAGGACAAGGTGTTCGTTGTTAATCAT
GATCCTACCTTAAATCGATTATGGAACAAGGACATTGCTATTGCTGATCTGAATTTTAGTGAATTACGGGCATTGGAGTG
CAGAATCCCGTCGCTCTCTGAAATAGTGAGTCAGTATGGGAATTCCATGCATTTATTTATTGAATTAAAAACAGCTATTG
AGGAGGAAGAGATATTAGTGCAAACCCTGCAACATTTAACGCCATGTAAAGATTTTCATTTATTGACTTTGCAGGAATCT
ACCTTTAAAAAATTGTGTTCTTTTCCCAGACAATCTTTATTGCTTGTTGCAGTGCATAATAACGTTAAGAAATTTTGTGA
ACTAAGCATCAAGGAGGGGTATGGAGGCGTACTGGGTAATTATTTATTATTGACTAATAGGGCATTAAAATATTTACAAG
ATGCCAATCAACATTTTGGCGTGGGATTTGTTGATTCCAAAAACAGTCTGTATAGAGAATTAAATAGAGGGGTTAAATGG
CTCTTTACTAATGAGGCAATAAACATTAATCAGTATTTAAATGACTTAAAAAATAGCATGTAA

Upstream 100 bases:

>100_bases
AGTTTAGTCGATTTTTGCGATTTTGTGCTAATGGCGTATTTTGCCTTTTATTTTATGCCGGCATAAAATGATTAAAATTG
GACTATTAGGATAATTGGTT

Downstream 100 bases:

>100_bases
TCATTTTGACAATACTCCTGCCTGTTTTTGACAATTCAATAATCATCACATAGTCTTAAATTAACAGTTCGATTTTATCA
TGTAGCAAAGGTAACTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphodiester Phosphodiesterase; Monophosphatase/Phosphodiesterase Bifunctional

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLLKCIEKIVDGYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVVNH
DPTLNRLWNKDIAIADLNFSELRALECRIPSLSEIVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAININQYLNDLKNSM

Sequences:

>Translated_260_residues
MLLKCIEKIVDGYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVVNH
DPTLNRLWNKDIAIADLNFSELRALECRIPSLSEIVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAININQYLNDLKNSM
>Mature_260_residues
MLLKCIEKIVDGYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVVNH
DPTLNRLWNKDIAIADLNFSELRALECRIPSLSEIVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAININQYLNDLKNSM

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29685; Mature: 29685

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKCIEKIVDGYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETG
CHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHCC
CWGIELDVHLTKDKVFVVNHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEIVSQYG
CEEEEEEEEEECCEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHC
NSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQESTFKKLCSFPRQSLLLVAVHN
CCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHEEEEEEHH
NVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCEEE
LFTNEAININQYLNDLKNSM
EEECCEEEHHHHHHHHHHCC
>Mature Secondary Structure
MLLKCIEKIVDGYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETG
CHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHCC
CWGIELDVHLTKDKVFVVNHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEIVSQYG
CEEEEEEEEEECCEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHC
NSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQESTFKKLCSFPRQSLLLVAVHN
CCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHEEEEEEHH
NVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCEEE
LFTNEAININQYLNDLKNSM
EEECCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA