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The map label for this gene is 54295798

Identifier: 54295798

GI number: 54295798

Start: 3294631

End: 3296223

Strand: Reverse

Name: 54295798

Synonym: lpl2888

Alternate gene names: NA

Gene position: 3296223-3294631 (Counterclockwise)

Preceding gene: 54295799

Following gene: 54295797

Centisome position: 98.52

GC content: 42.69

Gene sequence:

>1593_bases
ATGAAGTTTAAAAAAATTATTTTGGCTCTCGCTTGTTTATCATCGCCATTATATGCGGATCAAGATCAACAACTGAAAAG
TGAAATTCAACGATTACAGCATCAAGCAGAAGATTTACAAGCCCAACTCAACCGATTACAAAAACAATTAGCAAATCATA
AAAGCTCTCAGCAAAAGCACGAGCAACAGGCTGCCACAAAGCCTGCAGAACCACAGAGTAAGCCGACAGTTAAATCAGGG
GCTGCAATAGAAGAAAAATATCACTCATCCAAAGTCGAAGTGCATGCGCCTGATGCCCACCCAGAGTCAATAAGCTTTTA
TCCAACAGCATTGATAGCCGATAACCGAGTAGTTACTTATATAGCAGGGACTCCTGTAGTAAGCTCGCCATTCCTTGGCG
ATAGGCCTGCGTTTGATGGCTCTGATTATATAGTAAACATTTCTAGTATTAATAGGGATGTTCGTTTATTGCAGCAGCGA
CGACGCTTATACAGAGCCTACCAAAAAATAGGTTACCCTATCCCTAATATGCCAATTATTTCATTAAGTGGTAAAACAGA
ACCTGCTGCGACATTTAACAATCCATTTCGATCAACTAATACGGATGGTGATATTACGCTAGGCTCAAGTGAACTGGACG
TTGCTGCTGCATTGAATGAAAATGTCGAAGCTTATATTGCAATTGCCTATGATGAAAGCCCTCCTGCAATTGGCCCGCGG
GTTAATAACTCGGCATTTAATTTGAATATGGGATTTGTCAACATTGGTAACTTGGATAAAAGCCCGCTTTATTTTACTGC
AGGGCAAGTCTATGTTCCATTCGGCCGTTATTCCAGTGCAATGGTAAGTTCCCCTGTGACAATGAATTTGGCAAGAACCA
AGACAAGGCCTGTCATTTTCGGTTATAAGTCTCAAGGTGATACCGGTCCTTTCGGTGCTGTTTATGGCTACAGAAGTGAT
ACCACATTAGGTCGCTCAGGAGTCGGTGGCGTTAATCTGGGGTATATTTTCGGGTTTGATAATGACATCAATGGCGAGAT
AGGGGGCGGCTTTATTAGCTCTGTTGCTGATGCAGGCGGTATGCAAAGTACTGGATCGAATGTGGGGACAACATTTGGCG
GTTTTGGCTCCATAACAAACGGTAATGAAAACGTTCGAAAAACAAAAGCAGCTGATGTCCACGGTCACGTAGGGTATGAT
CGTTATAATCTGACTTTGGAATGGGTTGGTGCCATACAAAGTTTTAGACCCCAGGATTTAAGTTTTAATGGCCAAGGTGC
CAGACCCCAAGCTGCCCAAGCAGAGCTGGGTATGACTTTTATGGCTTTCAACAGACCGGCCTCCATCGGAGTTGGTTATC
AGTGGACAAAAGAAGCATTAGCACTGAATCTACCTAAACGACGCTATGTCGGAGTGTTTAACATTTCCATTTGGAAAGAC
ACAGTCGAGAGTATTGAGTACAGACATGATATTGATTATGGAATTACTCAGTTCGCTAATGGCGCTGCACCTCAAGGTTT
TGTTAATCTTCCAACTTTGGGTACAGGAAAATCTGCCGATACTGTTTCAGCCCAAATTGGCGTTTATTTCTAA

Upstream 100 bases:

>100_bases
AATTTTAGCGGAGTGATCCTATAGCCAGCCAGTAATTGCCGCGCTATAATCCGGTGGCTATCCGTTTAGGATGTAAAAAT
AATAAACAGGAGTACCCCGC

Downstream 100 bases:

>100_bases
ATTATTTCCATTCAAATAGCAGGCTTGTAACAATTCAATCGGTTACAAGCTGATGTGTTTAGGGGCTGCTTACACCGGAT
GCGGGGTAAGTATCCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKHEQQAATKPAEPQSKPTVKSG
AAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTYIAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLLQQR
RRLYRAYQKIGYPIPNMPIISLSGKTEPAATFNNPFRSTNTDGDITLGSSELDVAAALNENVEAYIAIAYDESPPAIGPR
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSSPVTMNLARTKTRPVIFGYKSQGDTGPFGAVYGYRSD
TTLGRSGVGGVNLGYIFGFDNDINGEIGGGFISSVADAGGMQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYD
RYNLTLEWVGAIQSFRPQDLSFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKRRYVGVFNISIWKD
TVESIEYRHDIDYGITQFANGAAPQGFVNLPTLGTGKSADTVSAQIGVYF

Sequences:

>Translated_530_residues
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKHEQQAATKPAEPQSKPTVKSG
AAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTYIAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLLQQR
RRLYRAYQKIGYPIPNMPIISLSGKTEPAATFNNPFRSTNTDGDITLGSSELDVAAALNENVEAYIAIAYDESPPAIGPR
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSSPVTMNLARTKTRPVIFGYKSQGDTGPFGAVYGYRSD
TTLGRSGVGGVNLGYIFGFDNDINGEIGGGFISSVADAGGMQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYD
RYNLTLEWVGAIQSFRPQDLSFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKRRYVGVFNISIWKD
TVESIEYRHDIDYGITQFANGAAPQGFVNLPTLGTGKSADTVSAQIGVYF
>Mature_530_residues
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKHEQQAATKPAEPQSKPTVKSG
AAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTYIAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLLQQR
RRLYRAYQKIGYPIPNMPIISLSGKTEPAATFNNPFRSTNTDGDITLGSSELDVAAALNENVEAYIAIAYDESPPAIGPR
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSSPVTMNLARTKTRPVIFGYKSQGDTGPFGAVYGYRSD
TTLGRSGVGGVNLGYIFGFDNDINGEIGGGFISSVADAGGMQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYD
RYNLTLEWVGAIQSFRPQDLSFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKRRYVGVFNISIWKD
TVESIEYRHDIDYGITQFANGAAPQGFVNLPTLGTGKSADTVSAQIGVYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0422 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2888_LEGPL (Q5WSJ0)

Other databases:

- EMBL:   CR628337
- RefSeq:   YP_128213.1
- ProteinModelPortal:   Q5WSJ0
- STRING:   Q5WSJ0
- GeneID:   3115008
- GenomeReviews:   CR628337_GR
- KEGG:   lpf:lpl2888
- NMPDR:   fig|297245.3.peg.1178
- LegioList:   lpl2888
- eggNOG:   NOG76863
- HOGENOM:   HBG433287
- OMA:   DNDINGE
- ProtClustDB:   CLSK914427
- BioCyc:   LPNE297245:LPL2888-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57492; Mature: 57492

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKH
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
EQQAATKPAEPQSKPTVKSGAAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTY
HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEECEEEEEECCEEEEE
IAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLLQQRRRLYRAYQKIGYPIPNMPII
EECCCCCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SLSGKTEPAATFNNPFRSTNTDGDITLGSSELDVAAALNENVEAYIAIAYDESPPAIGPR
EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHCCCCEEEEEEEECCCCCCCCCC
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSSPVTMNLARTKTRPVIF
CCCCEEEEEECEEEECCCCCCCEEEECCEEEEECCCCCHHHHCCCEEEEEECCCCCCEEE
GYKSQGDTGPFGAVYGYRSDTTLGRSGVGGVNLGYIFGFDNDINGEIGGGFISSVADAGG
EECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC
MQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYDRYNLTLEWVGAIQSFRPQDL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCC
SFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKRRYVGVFNISIWKD
CCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEECCCCHHEEEEEEEEEHHH
TVESIEYRHDIDYGITQFANGAAPQGFVNLPTLGTGKSADTVSAQIGVYF
HHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKH
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
EQQAATKPAEPQSKPTVKSGAAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTY
HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEECEEEEEECCEEEEE
IAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLLQQRRRLYRAYQKIGYPIPNMPII
EECCCCCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SLSGKTEPAATFNNPFRSTNTDGDITLGSSELDVAAALNENVEAYIAIAYDESPPAIGPR
EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHCCCCEEEEEEEECCCCCCCCCC
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSSPVTMNLARTKTRPVIF
CCCCEEEEEECEEEECCCCCCCEEEECCEEEEECCCCCHHHHCCCEEEEEECCCCCCEEE
GYKSQGDTGPFGAVYGYRSDTTLGRSGVGGVNLGYIFGFDNDINGEIGGGFISSVADAGG
EECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC
MQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYDRYNLTLEWVGAIQSFRPQDL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCC
SFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKRRYVGVFNISIWKD
CCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEECCCCHHEEEEEEEEEHHH
TVESIEYRHDIDYGITQFANGAAPQGFVNLPTLGTGKSADTVSAQIGVYF
HHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA