Click here to switch to the map view.

The map label for this gene is 54295676

Identifier: 54295676

GI number: 54295676

Start: 3162582

End: 3163964

Strand: Reverse

Name: 54295676

Synonym: lpl2764

Alternate gene names: NA

Gene position: 3163964-3162582 (Counterclockwise)

Preceding gene: 54295677

Following gene: 54295675

Centisome position: 94.57

GC content: 41.43

Gene sequence:

>1383_bases
ATGCATGTTAATGAGTATATCCACTATGATGTGCAGGAGCTCGCTGAACTGATCAAAAACCATCAGGTTGGTGCTGAGGA
AGTTTTGCGGTGTGCGCAAGAACGCCTATATCAAGTGAATCCTTCATTAAATGCCGTAGTTACAGATTGTTTTGAATATG
CGCATCAATGCCTTGCGAAAATGAAAGGTAACGAGCCCTATTATGGTGTTCCGTTATTAGTCAAGGATCTGGGCCATGCC
ATAGAGGGCATTCGACTAACGGAAGGGTCAAGGTTTTTTTCAAAAAATCTGGCTGAGACAAACAGTGATTTGATTAATAA
ATTGATTACTCTTGGTTTTGTACCATTTGCAAAAACAAATACTTCAGAATTAGGCCTTTCCTGCGTTACTGACTCTAATT
TATTTGGGCCTTGCAGAAATCCTTTTGATACTATGAGAACGGCAGGCGGATCTTCTGGTGGTTCTGCTGCTGCCATAATG
GCAGGGATAGCGCCCATAGCTACGGCAAGCGATGGGGGCGGGTCGATTCGTATTCCAGCGGCTTGTTGTGGTTTGTTTGG
ATTCAAACCGACACCAGGTCTGGTTCCCTCAGGACCATGGATTGATGAAGCATGGTCCGGGATGGCTACCAGTTTTATAC
TCACTCGTTCCATGAGTGATGCTATTGCATTGTTTAAAAATGTAATAAACCCCATGCGACTTAACAGACTATCGAGAAAG
AAAAAAAAATTGCTTATTACCGAGTTGACAGGCGCTTTTGCCGAGGTACCAATTGCAAGGGAATGCCAGGAGGCGGTAGA
GAAAATAAAAGAAATCCTGAAAAATTCAGGCCACAGATTAAATGAAGTACACTTGCCATTGGACCTGCAAGTTATCAGTT
CATGCGCCCATACTTTAATTGCAGCGAGCACGTATACGAAAGTAAAAACTCAAGAACAAATCAGTGGCAGAAAACCAATG
ATTCATGAATTGGAGCCCATAACATGGGAATTTTATTACAGAGGAAAAATGGTCTCAGCTTATGAATTCATTATTGCCAA
AAACAAACTATACCAATCACTAAGACCTCTGCATCAATTATTGGAAAAAACAGACATTGTATTAACTCCTGCATTGGCTC
AGTTACCCCTGTTAATCGGTCATTTGCGAATTGATGAGGAATTCAATAAGTATCTACAAAAAAAGAAAGAGTTTTCACCT
TTTACCTCCCTGTTTAATCAAGGTGGATTACCCGCTATGACTGTACCAGTTATGTTCCACCATCATTTGCCTGTCTCTGT
GCAAATGGGTTCAGCAAAAGGCAATGATTTGCTCTTATTGGAGTTGGCTCATGAATTACAGTCTGTGCTGCCAAAAAATA
TCACGCCTGCATCAATTCCTTGA

Upstream 100 bases:

>100_bases
TCAGGCGACTATGATAACAACAGCTATAATGTTATAGATAACCTTGTAAAGACTAATGTTCTCTCTTTATAAAGCTCTCT
GGCTATTGTAGGAATTGAGT

Downstream 100 bases:

>100_bases
TGCTGATTTTTTGTAAGTTTTCATTTATCGAACCTTGTGTTAAGTTAACTGTAGCTTTTCATAAAATTAAGAATAAGTGA
TTGTTTTTTATAGCTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MHVNEYIHYDVQELAELIKNHQVGAEEVLRCAQERLYQVNPSLNAVVTDCFEYAHQCLAKMKGNEPYYGVPLLVKDLGHA
IEGIRLTEGSRFFSKNLAETNSDLINKLITLGFVPFAKTNTSELGLSCVTDSNLFGPCRNPFDTMRTAGGSSGGSAAAIM
AGIAPIATASDGGGSIRIPAACCGLFGFKPTPGLVPSGPWIDEAWSGMATSFILTRSMSDAIALFKNVINPMRLNRLSRK
KKKLLITELTGAFAEVPIARECQEAVEKIKEILKNSGHRLNEVHLPLDLQVISSCAHTLIAASTYTKVKTQEQISGRKPM
IHELEPITWEFYYRGKMVSAYEFIIAKNKLYQSLRPLHQLLEKTDIVLTPALAQLPLLIGHLRIDEEFNKYLQKKKEFSP
FTSLFNQGGLPAMTVPVMFHHHLPVSVQMGSAKGNDLLLLELAHELQSVLPKNITPASIP

Sequences:

>Translated_460_residues
MHVNEYIHYDVQELAELIKNHQVGAEEVLRCAQERLYQVNPSLNAVVTDCFEYAHQCLAKMKGNEPYYGVPLLVKDLGHA
IEGIRLTEGSRFFSKNLAETNSDLINKLITLGFVPFAKTNTSELGLSCVTDSNLFGPCRNPFDTMRTAGGSSGGSAAAIM
AGIAPIATASDGGGSIRIPAACCGLFGFKPTPGLVPSGPWIDEAWSGMATSFILTRSMSDAIALFKNVINPMRLNRLSRK
KKKLLITELTGAFAEVPIARECQEAVEKIKEILKNSGHRLNEVHLPLDLQVISSCAHTLIAASTYTKVKTQEQISGRKPM
IHELEPITWEFYYRGKMVSAYEFIIAKNKLYQSLRPLHQLLEKTDIVLTPALAQLPLLIGHLRIDEEFNKYLQKKKEFSP
FTSLFNQGGLPAMTVPVMFHHHLPVSVQMGSAKGNDLLLLELAHELQSVLPKNITPASIP
>Mature_460_residues
MHVNEYIHYDVQELAELIKNHQVGAEEVLRCAQERLYQVNPSLNAVVTDCFEYAHQCLAKMKGNEPYYGVPLLVKDLGHA
IEGIRLTEGSRFFSKNLAETNSDLINKLITLGFVPFAKTNTSELGLSCVTDSNLFGPCRNPFDTMRTAGGSSGGSAAAIM
AGIAPIATASDGGGSIRIPAACCGLFGFKPTPGLVPSGPWIDEAWSGMATSFILTRSMSDAIALFKNVINPMRLNRLSRK
KKKLLITELTGAFAEVPIARECQEAVEKIKEILKNSGHRLNEVHLPLDLQVISSCAHTLIAASTYTKVKTQEQISGRKPM
IHELEPITWEFYYRGKMVSAYEFIIAKNKLYQSLRPLHQLLEKTDIVLTPALAQLPLLIGHLRIDEEFNKYLQKKKEFSP
FTSLFNQGGLPAMTVPVMFHHHLPVSVQMGSAKGNDLLLLELAHELQSVLPKNITPASIP

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI195972892, Length=199, Percent_Identity=34.1708542713568, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI222831590, Length=504, Percent_Identity=23.6111111111111, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71990152, Length=192, Percent_Identity=34.375, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17537465, Length=199, Percent_Identity=31.1557788944724, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17543272, Length=448, Percent_Identity=25.2232142857143, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17556264, Length=306, Percent_Identity=28.1045751633987, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538252, Length=311, Percent_Identity=27.3311897106109, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17538254, Length=293, Percent_Identity=29.6928327645051, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17556276, Length=306, Percent_Identity=29.0849673202614, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17556278, Length=306, Percent_Identity=29.0849673202614, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6319685, Length=396, Percent_Identity=26.010101010101, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320448, Length=238, Percent_Identity=29.8319327731092, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550774, Length=476, Percent_Identity=26.2605042016807, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24648435, Length=476, Percent_Identity=26.2605042016807, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24648437, Length=476, Percent_Identity=26.2605042016807, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI21356731, Length=492, Percent_Identity=26.0162601626016, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24644968, Length=207, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI161078093, Length=483, Percent_Identity=25.879917184265, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24648441, Length=409, Percent_Identity=25.4278728606357, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648439, Length=409, Percent_Identity=25.4278728606357, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24652985, Length=480, Percent_Identity=25, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19922090, Length=480, Percent_Identity=25, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24652981, Length=480, Percent_Identity=25, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24652983, Length=480, Percent_Identity=25, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24648113, Length=428, Percent_Identity=25.7009345794392, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 50738; Mature: 50738

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVNEYIHYDVQELAELIKNHQVGAEEVLRCAQERLYQVNPSLNAVVTDCFEYAHQCLAK
CCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MKGNEPYYGVPLLVKDLGHAIEGIRLTEGSRFFSKNLAETNSDLINKLITLGFVPFAKTN
HCCCCCCCCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
TSELGLSCVTDSNLFGPCRNPFDTMRTAGGSSGGSAAAIMAGIAPIATASDGGGSIRIPA
CHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHH
ACCGLFGFKPTPGLVPSGPWIDEAWSGMATSFILTRSMSDAIALFKNVINPMRLNRLSRK
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KKKLLITELTGAFAEVPIARECQEAVEKIKEILKNSGHRLNEVHLPLDLQVISSCAHTLI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH
AASTYTKVKTQEQISGRKPMIHELEPITWEFYYRGKMVSAYEFIIAKNKLYQSLRPLHQL
HHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LEKTDIVLTPALAQLPLLIGHLRIDEEFNKYLQKKKEFSPFTSLFNQGGLPAMTVPVMFH
HHHCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHC
HHLPVSVQMGSAKGNDLLLLELAHELQSVLPKNITPASIP
CCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHVNEYIHYDVQELAELIKNHQVGAEEVLRCAQERLYQVNPSLNAVVTDCFEYAHQCLAK
CCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MKGNEPYYGVPLLVKDLGHAIEGIRLTEGSRFFSKNLAETNSDLINKLITLGFVPFAKTN
HCCCCCCCCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
TSELGLSCVTDSNLFGPCRNPFDTMRTAGGSSGGSAAAIMAGIAPIATASDGGGSIRIPA
CHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHH
ACCGLFGFKPTPGLVPSGPWIDEAWSGMATSFILTRSMSDAIALFKNVINPMRLNRLSRK
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KKKLLITELTGAFAEVPIARECQEAVEKIKEILKNSGHRLNEVHLPLDLQVISSCAHTLI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH
AASTYTKVKTQEQISGRKPMIHELEPITWEFYYRGKMVSAYEFIIAKNKLYQSLRPLHQL
HHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LEKTDIVLTPALAQLPLLIGHLRIDEEFNKYLQKKKEFSPFTSLFNQGGLPAMTVPVMFH
HHHCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHC
HHLPVSVQMGSAKGNDLLLLELAHELQSVLPKNITPASIP
CCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]