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The map label for this gene is tex [H]

Identifier: 54295658

GI number: 54295658

Start: 3141160

End: 3143529

Strand: Reverse

Name: tex [H]

Synonym: lpl2746

Alternate gene names: 54295658

Gene position: 3143529-3141160 (Counterclockwise)

Preceding gene: 54295659

Following gene: 54295657

Centisome position: 93.96

GC content: 41.14

Gene sequence:

>2370_bases
ATGGCAGAAGTGATGTTGGCGTCAGCCGCAATTATTGCAGATGAACTTAAGGTCAAAGTATCGCAGGTAGAAACTGCTAT
TCGGCTGTTAGATGAAGGAGCAACGGTACCTTTTATTGCGCGTTATCGCAAAGAAGCAACTGGAGGGCTTGACGATGTGC
AATTGCGGTTTCTTGCGGAAAGACTAATTTATTTGCGTGAATTGGATGAGAGACGAACAGTCATTTTGCAATCCATTCGT
GAACAAGAAAAATTAACACCGGAATTGGAACAAAGCATATTAGCTGCTGAAACTAAAACACGCCTGGAAGACTTGTATTT
ACCCTATAGGCCTAAACGTCGTACAAAAGCGCAAATTGCTATTGAAGCAGGATTAGAGCCATTAGCTCATGCTTTATGGA
AAGACCCTGCTTTAGATCCTGAAGAACAGGCTTCCCAATTTATAAATAGCGAAGCAGGGATTGAAAATACTCAGGCCGCC
CTGGATGGTGCGCGACATATTTTAATGGAGCATTTTGCTGAAGACGCCGAGTTAATTAACGAATTGCGAGAGTATTTGTG
GCAACACGGAATAGTCAAATCAGTAGGAAACAGTACTAAAAAGGATCAGGCGAATAAATTTTCTGATTACTTTGATTATT
CGGAAGCGATTAAAAAAATTCCATCTCATCGGGCACTGGCCTTGTTCCGGGGGCGACGTGAAGGAATTCTGCAAGTAAGT
CTGGTTTTACCTGATCAGGATGCCAATTATGGAGAGAATAAGGTTGCTGCTTACTTTAATGTCACTGACAGGCAAAGAAA
AGCGGATGGCTGGCTTATAGATACGGTCAGGATGACTTGGAAAATTAAGTTATTTACCAAGCTGGAGCTTGAGTTATTAA
CTCGTCTGCGCGAAATAGCAGATGAGGAAGCCATTAAAGTGTTTTCCAAAAATTTACGTGATCTGTTGCTGGCTGCCCCC
GCAGGTCCTCAAGTGACGATAGGTCTTGACCCTGGAATTAGAACGGGTGTTAAAGTGGTTGTGGTGGATGCTACAGGTAA
GCTGTTGGATTACTCTGTTATTTTTCCATTTGCTCCTCAAAATGAATGGCATCAATCCATTGCGGATTTGGCCAAGCTTG
CTGCGAAATATCAGGTTAATTTAATCAGCATAGGAAATGGCACCGGTTCTCGGGAAACAGAGCGATTGGTAGCTGATTTA
ATTAAAATGTATCCTGATTTGAAATTAACAAAAATAATTGTCAGTGAAGCCGGGGCATCTGTTTATTCCGCATCTGAAAT
TGCAGCTAATGAATTTCCTGATTTGGATGTTTCCCTAAGAGGCGCTGTATCTATTGCACGAAGATTGCAAGATCCCTTGG
CAGAACTGGTAAAAATTGAAGCCAAATCAATAGGTGTTGGCCAGTATCAACACGATGTGAACCAGGCAAAGTTGGCGCGT
TGCCTGGATGGTGTTGTCGAGGATTGTGTGAATGCTGTTGGCGTAGACATTAATACAGCCTCTGCAGCTTTGCTATCCCA
TATTTCTGGATTGAATGATACTTTAGCTAAAAACATTGTGCAATTTCGCGATGAACATGGTGCTTTCACAAACAGAAATC
AATTAAAAAATATCAATCGCATGGGAGAAAAGGCTTTTCAGCAAGCAGCCGGCTTTTTGCGCATTATGAATGGAGATAAT
GCTTTAGATGCCTCTTGTGTTCATCCTGAAGCCTATCCTTTAGTGGAAAAAATTATTTCAGATAAAAAAGTTAGTATTAA
GGAAATAATCGGCAATAGAGAATTATTGCAGAGTATTAACGCCGAACAATATGTGGATGAGAGTTTTGGTTTGCCAACAA
TACGAGATGTTTTACGTGAATTGGAGAAACCGGGGCGAGATCCAAGACCAGAATTCAGAACCGCTCAATTTAAGGAAGGT
GTTGAGGACATTAAAGATTTGGAACAAGGAATGGTCCTGGAAGGTGTTGTAAGTAATGTGACTAATTTTGGTGCCTTTGT
TGATATTGGCGTTCACCAGGATGGGTTGGTACATATTTCAGCAATGACCAATCGCTTTATTACAGATCCTCGTTCTGTTG
TTAAAGCCGGTGATATTGTAAAAGTTAAAGTGGTTGAAGTGGATAAAGAACGCCGAAGGATTGGTTTAAGTATGAAGCTG
AATGATGAGCAAGCTCCTGCTGTATTGCAGAAAGCTAATAAACCACAGCCGGCAAGAAAACAAGCGGAACAAAAGCAGCC
TGAATTTAAGAAGAAGCAAGAACATAAGAAAAAACCAGATAAGATAAAAAAATCGGAGCCAGTCAAAAAAACCGTATTTA
ATACAGCGATGGCCGATGCTTTAGCCAAACTAAAACGTGGTGGAGAATAG

Upstream 100 bases:

>100_bases
AGGACAATTTGTATATATATTAGCTTAATTTCTATATCGCATTATAGTATCTGATGAGTATATAATGAGACGATTTTTAT
CATGTTTTACGGGGATATGA

Downstream 100 bases:

>100_bases
GGATGCAAACACCTAAAGGAGAGTTGACTATCCAAACTTTGGCCATGCCTTTAAATACTAATGCCAATGGCGATATATTT
GGCGGATGGATAGTTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIR
EQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAA
LDGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
LVLPDQDANYGENKVAAYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAP
AGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADL
IKMYPDLKLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDN
ALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDESFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEG
VEDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKSEPVKKTVFNTAMADALAKLKRGGE

Sequences:

>Translated_789_residues
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIR
EQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAA
LDGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
LVLPDQDANYGENKVAAYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAP
AGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADL
IKMYPDLKLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDN
ALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDESFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEG
VEDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKSEPVKKTVFNTAMADALAKLKRGGE
>Mature_788_residues
AEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIRE
QEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAAL
DGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVSL
VLPDQDANYGENKVAAYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAPA
GPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLI
KMYPDLKLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLARC
LDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA
LDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDESFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGV
EDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKLN
DEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKSEPVKKTVFNTAMADALAKLKRGGE

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=773, Percent_Identity=34.0232858990944, Blast_Score=372, Evalue=1e-103,
Organism=Homo sapiens, GI27597090, Length=732, Percent_Identity=21.3114754098361, Blast_Score=96, Evalue=1e-19,
Organism=Escherichia coli, GI87082262, Length=719, Percent_Identity=60.0834492350487, Blast_Score=878, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=42.1052631578947, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=718, Percent_Identity=29.2479108635098, Blast_Score=239, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17552892, Length=622, Percent_Identity=22.1864951768489, Blast_Score=79, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321552, Length=514, Percent_Identity=23.1517509727626, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI62484314, Length=773, Percent_Identity=31.3065976714101, Blast_Score=350, Evalue=3e-96,
Organism=Drosophila melanogaster, GI24640080, Length=563, Percent_Identity=21.1367673179396, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 88006; Mature: 87875

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RLIYLRELDERRTVILQSIREQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELIN
HHHCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
HHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEE
LVLPDQDANYGENKVAAYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIA
EEECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DEEAIKVFSKNLRDLLLAAPAGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLIKMYPDLKLTKIIVSEAGAS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
VYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGEKAFQQAAGFLRIMNGDNALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSIN
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCC
AEQYVDESFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGVEDIKDLEQGMVLEGVVSNV
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
HHCCCEEEECCCCCCCEEEEHHHHHHHCCCHHHHCCCCEEEEEEEECCHHHHHCCCEEEE
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKSEPVKKTVFNTAMADA
CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LAKLKRGGE
HHHHHCCCC
>Mature Secondary Structure 
AEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RLIYLRELDERRTVILQSIREQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELIN
HHHCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
HHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEE
LVLPDQDANYGENKVAAYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIA
EEECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DEEAIKVFSKNLRDLLLAAPAGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLIKMYPDLKLTKIIVSEAGAS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
VYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGEKAFQQAAGFLRIMNGDNALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSIN
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCC
AEQYVDESFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGVEDIKDLEQGMVLEGVVSNV
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
HHCCCEEEECCCCCCCEEEEHHHHHHHCCCHHHHCCCCEEEEEEEECCHHHHHCCCEEEE
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKSEPVKKTVFNTAMADA
CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LAKLKRGGE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]