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The map label for this gene is dtpB [H]

Identifier: 54295633

GI number: 54295633

Start: 3105322

End: 3106824

Strand: Reverse

Name: dtpB [H]

Synonym: lpl2720

Alternate gene names: 54295633

Gene position: 3106824-3105322 (Counterclockwise)

Preceding gene: 54295634

Following gene: 54295632

Centisome position: 92.86

GC content: 38.12

Gene sequence:

>1503_bases
ATGCTGAATTTATTTCGTGAGCAACCTCGTGCATTTCACATGATTTTTATGTTGGAATTATGGGAGCGATTTGGGTTCTA
TACAGTTCAGGGAATTCTTACTCTTTATTTTATTCGCTACCTGGGTTATAGCGATTTAGAGTCTTACTATACCTTTGGTG
CTTATTCTGCGCTGGTATATGGAATGGTGGTTATTGGCGGCTATTTGGGAGACAGAATTCTAGGAACCAAGCGAACCATC
GTTCTCGGTCTTGTTGTGCTGGCCATGGGTTACTTTTCTCTTGCAGTTACTGATAAGCAGCATGTATTTCTTGCATTAGG
ATTGATTTGTGTAGGTAATGGTCTATTCAAAGCGAATCCATCGAATTTGTTATCCAAATGCTATGATGACAATGATCCAC
GATTACATGGCGGTTTTACCCTTTATTATATGGCTATTAATCTGGGCAGTATGGTTGCATTATTCGTCGGGCCAGCAGTA
TCAAGCGCTTATGGTTACTCTTATGCTTACATGATTAGTGCAATAGGTTTGATTTTGGGTATTGTGAATTATTGGTATCA
ACGACAACATGTGTCTCATGTCAATACAAAAGCGGATCTTCGTAAAATAACAGCCTTTCACTGGGGAATAATAATAACGG
GTGTTTTAATACTTACTGGAATATCAGCTTATTTATTACAACATGTCATGCTTGCCAAAAATCTGTTGTGGGGTATTACT
CTCCTGGTAGTGTCTGTTTATATCTATTTGATGCGCAAACAGGATCAGGCTTCTTTTATGAGAATGTTAGTCGCTTTGGT
TTTAATGATTGAAGCAGTCATATTTTTTACTTTATACCAACAGATGCCTACTTCATTAAATTTGTTTGCTGTAAATAATG
TAATACCTACTTTCCTGGGCATCACTATTGATCCGCAAAGCTTTCAAGCTCTCAATCCAATATGGATTGTATTAATGAGT
CCCGTATTAGCTTATTTCTATAGAAAATTGCATCAACATAATATTTTATTTTCTATACCTTATAAATTTGCATTCGGTAT
GACCATGTGTGCAGTGAGCTTTTTAATGCTGTATTTTGCTCGTTATTTTTATGTTGGAAATGGCATGGTTTCTTCCTGGT
GGATGGTTTTCAGTTATTTATTCCAAAGCCTTGGTGAGTTATTAGTATCAGCTCTTGGTGTTGCAATGGTTGCTGAATTG
GTGCCGGCTGCTAATGCAGGGTTTGTTATGGGAATGTGGTTTTTAACTTCCGCAGTGGCGGGGTTTATTGGTGCTACTGT
CGCGTCTTTTACAGCACTTCCAGAGAATATCAAACCAGGGGTTGAGTCTTTATTGATTTATTCCGATGTATTTGCCTGTA
TTGGACTTGTTACTCTATTGATTGCAGTTATTATGTGGTTAGTATCACCTCGGCTCAGTCGCTATATTACAGTCCCTTCC
TTGGAAGGGGATAAGGATATAGAAACAGTAGAATACTCTACGACCTATATCCCCAGTCACTAG

Upstream 100 bases:

>100_bases
GATATAGAACATCCTGATGTCCCTAAAGTTTAAATCTGCATTGCAAAAAACAAGAATTTCCTTTAAGTTAAAAAAAATTA
CTATCAAGGAATGAAAATTC

Downstream 100 bases:

>100_bases
GTTTGTTTATTTCCCTTTTCGGCAATTGAGTTGGTTTTAATATCACCAATTGCCGTTTTTTATTTTTGTCCTATATTGCT
ATTGCATTCTTGAATAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MLNLFREQPRAFHMIFMLELWERFGFYTVQGILTLYFIRYLGYSDLESYYTFGAYSALVYGMVVIGGYLGDRILGTKRTI
VLGLVVLAMGYFSLAVTDKQHVFLALGLICVGNGLFKANPSNLLSKCYDDNDPRLHGGFTLYYMAINLGSMVALFVGPAV
SSAYGYSYAYMISAIGLILGIVNYWYQRQHVSHVNTKADLRKITAFHWGIIITGVLILTGISAYLLQHVMLAKNLLWGIT
LLVVSVYIYLMRKQDQASFMRMLVALVLMIEAVIFFTLYQQMPTSLNLFAVNNVIPTFLGITIDPQSFQALNPIWIVLMS
PVLAYFYRKLHQHNILFSIPYKFAFGMTMCAVSFLMLYFARYFYVGNGMVSSWWMVFSYLFQSLGELLVSALGVAMVAEL
VPAANAGFVMGMWFLTSAVAGFIGATVASFTALPENIKPGVESLLIYSDVFACIGLVTLLIAVIMWLVSPRLSRYITVPS
LEGDKDIETVEYSTTYIPSH

Sequences:

>Translated_500_residues
MLNLFREQPRAFHMIFMLELWERFGFYTVQGILTLYFIRYLGYSDLESYYTFGAYSALVYGMVVIGGYLGDRILGTKRTI
VLGLVVLAMGYFSLAVTDKQHVFLALGLICVGNGLFKANPSNLLSKCYDDNDPRLHGGFTLYYMAINLGSMVALFVGPAV
SSAYGYSYAYMISAIGLILGIVNYWYQRQHVSHVNTKADLRKITAFHWGIIITGVLILTGISAYLLQHVMLAKNLLWGIT
LLVVSVYIYLMRKQDQASFMRMLVALVLMIEAVIFFTLYQQMPTSLNLFAVNNVIPTFLGITIDPQSFQALNPIWIVLMS
PVLAYFYRKLHQHNILFSIPYKFAFGMTMCAVSFLMLYFARYFYVGNGMVSSWWMVFSYLFQSLGELLVSALGVAMVAEL
VPAANAGFVMGMWFLTSAVAGFIGATVASFTALPENIKPGVESLLIYSDVFACIGLVTLLIAVIMWLVSPRLSRYITVPS
LEGDKDIETVEYSTTYIPSH
>Mature_500_residues
MLNLFREQPRAFHMIFMLELWERFGFYTVQGILTLYFIRYLGYSDLESYYTFGAYSALVYGMVVIGGYLGDRILGTKRTI
VLGLVVLAMGYFSLAVTDKQHVFLALGLICVGNGLFKANPSNLLSKCYDDNDPRLHGGFTLYYMAINLGSMVALFVGPAV
SSAYGYSYAYMISAIGLILGIVNYWYQRQHVSHVNTKADLRKITAFHWGIIITGVLILTGISAYLLQHVMLAKNLLWGIT
LLVVSVYIYLMRKQDQASFMRMLVALVLMIEAVIFFTLYQQMPTSLNLFAVNNVIPTFLGITIDPQSFQALNPIWIVLMS
PVLAYFYRKLHQHNILFSIPYKFAFGMTMCAVSFLMLYFARYFYVGNGMVSSWWMVFSYLFQSLGELLVSALGVAMVAEL
VPAANAGFVMGMWFLTSAVAGFIGATVASFTALPENIKPGVESLLIYSDVFACIGLVTLLIAVIMWLVSPRLSRYITVPS
LEGDKDIETVEYSTTYIPSH

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789911, Length=477, Percent_Identity=48.4276729559748, Blast_Score=454, Evalue=1e-129,
Organism=Escherichia coli, GI1787922, Length=475, Percent_Identity=45.8947368421053, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1786927, Length=485, Percent_Identity=27.4226804123711, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1790572, Length=467, Percent_Identity=28.051391862955, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 56114; Mature: 56114

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLFREQPRAFHMIFMLELWERFGFYTVQGILTLYFIRYLGYSDLESYYTFGAYSALVY
CCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GMVVIGGYLGDRILGTKRTIVLGLVVLAMGYFSLAVTDKQHVFLALGLICVGNGLFKANP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCH
SNLLSKCYDDNDPRLHGGFTLYYMAINLGSMVALFVGPAVSSAYGYSYAYMISAIGLILG
HHHHHHHCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IVNYWYQRQHVSHVNTKADLRKITAFHWGIIITGVLILTGISAYLLQHVMLAKNLLWGIT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVVSVYIYLMRKQDQASFMRMLVALVLMIEAVIFFTLYQQMPTSLNLFAVNNVIPTFLG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHC
ITIDPQSFQALNPIWIVLMSPVLAYFYRKLHQHNILFSIPYKFAFGMTMCAVSFLMLYFA
CEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH
RYFYVGNGMVSSWWMVFSYLFQSLGELLVSALGVAMVAELVPAANAGFVMGMWFLTSAVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GFIGATVASFTALPENIKPGVESLLIYSDVFACIGLVTLLIAVIMWLVSPRLSRYITVPS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCC
LEGDKDIETVEYSTTYIPSH
CCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MLNLFREQPRAFHMIFMLELWERFGFYTVQGILTLYFIRYLGYSDLESYYTFGAYSALVY
CCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GMVVIGGYLGDRILGTKRTIVLGLVVLAMGYFSLAVTDKQHVFLALGLICVGNGLFKANP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCH
SNLLSKCYDDNDPRLHGGFTLYYMAINLGSMVALFVGPAVSSAYGYSYAYMISAIGLILG
HHHHHHHCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IVNYWYQRQHVSHVNTKADLRKITAFHWGIIITGVLILTGISAYLLQHVMLAKNLLWGIT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVVSVYIYLMRKQDQASFMRMLVALVLMIEAVIFFTLYQQMPTSLNLFAVNNVIPTFLG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHC
ITIDPQSFQALNPIWIVLMSPVLAYFYRKLHQHNILFSIPYKFAFGMTMCAVSFLMLYFA
CEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH
RYFYVGNGMVSSWWMVFSYLFQSLGELLVSALGVAMVAELVPAANAGFVMGMWFLTSAVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GFIGATVASFTALPENIKPGVESLLIYSDVFACIGLVTLLIAVIMWLVSPRLSRYITVPS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCC
LEGDKDIETVEYSTTYIPSH
CCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA