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The map label for this gene is 54295363

Identifier: 54295363

GI number: 54295363

Start: 2789914

End: 2791464

Strand: Direct

Name: 54295363

Synonym: lpl2448

Alternate gene names: NA

Gene position: 2789914-2791464 (Clockwise)

Preceding gene: 54295360

Following gene: 54295366

Centisome position: 83.39

GC content: 40.36

Gene sequence:

>1551_bases
ATGTCTCCACGGATTTGTTGCTATAACCAATACCCTGGCTTATATCAAGATTTTGATGCGATGCGGGAAGATTTGCAGCG
AATTCAGAAGATGGGTTTTAAGCAAGTTTGGGTCAACCCATTTTATACACCTTGTCAATATAATCCTGTCCCTAACATGG
CTAATCGTATTCATAGCCCTTATGCCATGCAGGATGAATCAATTTATCCACGCTATGCCAAGAATGATAAAAGCGTTCAG
CAATACACTGCAAAAGCAAATGAGCTTGGTTTAATGCCTGTATTTGATTTGGTCGCAAGACACCTGGCGGTAGATCATCG
TTTTGTGAATGGCGATAAATTTTTTCTTGAAAAATACAATATTGATACGAAAAAATGGTTTAAACGTCACCCCAATGGAA
ATTTGGTGATGCATAACATGGACGAAAACTACAATCCGTTGGCCAATAATCCCTGGAGTGATGTAGCAACGTTTAACTAT
GATGACCCTGTCATTTGCGAACAAATCATCGAATATTATTGGAAACCATTTATCGAGCGTAATATTGAGCATCTTGGTTT
TCAGGGAATACGTATTGATGCCCCAGCCATGGTAAATAACAAGGTATTGTCTCGACTAACAGAAATCGCAAAGGAGGCTT
GCCAACGCAAATTTCAACGTGACCCACTTATTATTGCAGAAACGATAGGCAGAGGTTATATGGAAGAAAATCTTGCTTTG
AAAGGTATTGTAACCCACACGATGAATAGTGTGTTCTGGATGCCGGGCCCCGAAGGTGGCTATGGTTACTCATATAACTT
ATGGCAACAGGATGACAATTGGTTTACTCAAAATAAAGGATTATTACAACAGGTTGCTCCTACAATTGGTTTTCCTGGCT
CTCATGATGAGCCACGCTATATTCAGCAACTGGTGGAAAAAGGTATCCATGATGATAAATTGCTTGCAAAACGCATGCGC
GAAAAACTGGCTGTCAGCGCATTTTGTTCTGATGGCGGTTGGATTTTACAATACGGTGATGAATATGGTGCTACCAAACC
AGTAAACGTTTTTGATCCAACCCCTGTTGAATATCATCAACAAAAACATCTGAGACGATTTGATCTGTCAGACTATATCT
CTGAAATTAATACAACACTGGCCCAGCTACCCAATCCTCACTTCCCCGAATGGGCGCAGCGGGTCTTTCTTCCGAATCAT
CCAGATTTGGTAACCTTTATTGTTCACCAGGGTTGGGGTTATACTGGAACCTCATTCGTTATTGCGACCAACACCGATCC
CTCTCAGCAAATCCAATTAACAGAAAAAGAACTTGGAGAAATAATGCTGGCAAATGGCCGAAATAATACGACTGAAAAAC
AGATGAAACCACAAGTGCTTTATTTATGTGGCACAGTTCGCGCATCACCTGAATTGAAAAAAGAGATCCAAATTGTTACA
TCCAGACCAGCTACAAGTGAAAAGTCCATCCATTTTTTCCAGAGTCATACTGAAGAAAAGCAAATGAGCGAAAAACTGCC
TTTAGAGAAAACACCACCTGAATTTAAATAA

Upstream 100 bases:

>100_bases
GCATGCATAGGAATTAAATAATTGAAAATAATACAACAAGGTCGAATTTAATACTTCTACTATACTTCATATACATAGGA
ACAGAAATTGAGAAGTCAGC

Downstream 100 bases:

>100_bases
TAATATTTACCGGCTATATGCATTTATATTAATTACAGCCTGGAAAATCATTGCGGTTGCTATTTTGCTTCCTCACCAAT
TAAGTCACCACTTGACAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-Amylase; Alpha Amylase Catalytic Domain Family; Alpha Amylase Catalytic Domain Protein; Alpha Amylase Family Protein; Alpha-Amylase-Related Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain Subfamily

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQ
QYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLANNPWSDVATFNY
DDPVICEQIIEYYWKPFIERNIEHLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQRDPLIIAETIGRGYMEENLAL
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVAPTIGFPGSHDEPRYIQQLVEKGIHDDKLLAKRMR
EKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHQQKHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNH
PDLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQMKPQVLYLCGTVRASPELKKEIQIVT
SRPATSEKSIHFFQSHTEEKQMSEKLPLEKTPPEFK

Sequences:

>Translated_516_residues
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQ
QYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLANNPWSDVATFNY
DDPVICEQIIEYYWKPFIERNIEHLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQRDPLIIAETIGRGYMEENLAL
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVAPTIGFPGSHDEPRYIQQLVEKGIHDDKLLAKRMR
EKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHQQKHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNH
PDLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQMKPQVLYLCGTVRASPELKKEIQIVT
SRPATSEKSIHFFQSHTEEKQMSEKLPLEKTPPEFK
>Mature_515_residues
SPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQQ
YTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLANNPWSDVATFNYD
DPVICEQIIEYYWKPFIERNIEHLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQRDPLIIAETIGRGYMEENLALK
GIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVAPTIGFPGSHDEPRYIQQLVEKGIHDDKLLAKRMRE
KLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHQQKHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHP
DLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQMKPQVLYLCGTVRASPELKKEIQIVTS
RPATSEKSIHFFQSHTEEKQMSEKLPLEKTPPEFK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59897; Mature: 59765

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSP
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCC
YAMQDESIYPRYAKNDKSVQQYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEECC
IDTKKWFKRHPNGNLVMHNMDENYNPLANNPWSDVATFNYDDPVICEQIIEYYWKPFIER
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHC
NIEHLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQRDPLIIAETIGRGYMEENLAL
CHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHCCHH
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVAPTIGFPGSHDEPRY
HHHHHHHCCCEEECCCCCCCCCCEEECEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
IQQLVEKGIHDDKLLAKRMREKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHH
QKHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHPDLVTFIVHQGWGYTGTSFV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE
IATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQMKPQVLYLCGTVRASPELKKEIQIVT
EEECCCCCHHEEECHHHHCCEEEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHEEEE
SRPATSEKSIHFFQSHTEEKQMSEKLPLEKTPPEFK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSP
CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCC
YAMQDESIYPRYAKNDKSVQQYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEECC
IDTKKWFKRHPNGNLVMHNMDENYNPLANNPWSDVATFNYDDPVICEQIIEYYWKPFIER
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHC
NIEHLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQRDPLIIAETIGRGYMEENLAL
CHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHCCHH
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVAPTIGFPGSHDEPRY
HHHHHHHCCCEEECCCCCCCCCCEEECEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
IQQLVEKGIHDDKLLAKRMREKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHH
QKHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHPDLVTFIVHQGWGYTGTSFV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE
IATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQMKPQVLYLCGTVRASPELKKEIQIVT
EEECCCCCHHEEECHHHHCCEEEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHEEEE
SRPATSEKSIHFFQSHTEEKQMSEKLPLEKTPPEFK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA