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The map label for this gene is cynT [H]

Identifier: 54295338

GI number: 54295338

Start: 2753776

End: 2754513

Strand: Direct

Name: cynT [H]

Synonym: lpl2423

Alternate gene names: 54295338

Gene position: 2753776-2754513 (Clockwise)

Preceding gene: 54295337

Following gene: 54295339

Centisome position: 82.31

GC content: 40.92

Gene sequence:

>738_bases
ATGCCAAAAAAAATGCTCGTCGCTGCTTTCTTATGCAATATTTTTTGTAACCCCAGCCATCTCTATGCCTCATCAACAGA
GATACCCTTACTTGGGAAAACCATGAACCAGGCTAAACAACAACAAATGACTCCCAAGCAGGCATTGCAACGTTTAAAAG
ACGGTAATCAACGCTTCCTCAGTAATAAACCTTTAGCACGAGATTATCTAAAACAAGCCAAGCAATCAGCTTATGGCCAA
TATCCTTTTGCGGTCATCTTGAATTGTATGGACTCGCGCAGTGTTCCTGAATTCTTTTTTGATCAAGGATTGGCAGACCT
GTTTACCTTACGTGTTGCCGGCAATGTTCTCAACGATGACATTTTAGGAAGTATGGAATTTGCAACAAAAATAGCGGGAG
CACGTTTGGTAGTTGTCCTGGCTCACACCTCCTGTGGTGCTGTTGCAGGGGCATGCAAAGATGTTAAATTAGGGCATTTG
ACTGATGTTATAAATAAAATCCAGCCTGTTGTAAAACCCAGCATGGAAAGCACGGGCATTGATAATTGCTCTGACCCCAA
ACTGATTGATGACATGGCTAAAGCCAATGCCCTGCATGTTGTAAAAAATATACTGGAGCAAAGCCCTATTTTAAATGAAC
TAGTTAAGAATAAACAAATTGGGATTGTAGCGGGTCTTCATGATATTAAAACAGGTAAGGTGACTTTTTTTGAAGAAAAG
CGATCTGTCCCAGAGTAA

Upstream 100 bases:

>100_bases
CAATCAATATCCAGATACGCTCATTGAGAATTTATTTGAAGTAATCAATAATCGCAAATAACAGTTTAGGAAAATTAATA
ACATAACAAGGAGTTAACCA

Downstream 100 bases:

>100_bases
AGCAAGTTGGCAGTTGCCAACTTGCTTTAATATTTTCTTTCAAATGCAAGCCGAATTTGGTTACAATCGCATAATTTTTG
GTGAATGATTTTTTATATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPKKMLVAAFLCNIFCNPSHLYASSTEIPLLGKTMNQAKQQQMTPKQALQRLKDGNQRFLSNKPLARDYLKQAKQSAYGQ
YPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKIAGARLVVVLAHTSCGAVAGACKDVKLGHL
TDVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
RSVPE

Sequences:

>Translated_245_residues
MPKKMLVAAFLCNIFCNPSHLYASSTEIPLLGKTMNQAKQQQMTPKQALQRLKDGNQRFLSNKPLARDYLKQAKQSAYGQ
YPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKIAGARLVVVLAHTSCGAVAGACKDVKLGHL
TDVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
RSVPE
>Mature_244_residues
PKKMLVAAFLCNIFCNPSHLYASSTEIPLLGKTMNQAKQQQMTPKQALQRLKDGNQRFLSNKPLARDYLKQAKQSAYGQY
PFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKIAGARLVVVLAHTSCGAVAGACKDVKLGHLT
DVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEKR
SVPE

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 26890; Mature: 26758

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKMLVAAFLCNIFCNPSHLYASSTEIPLLGKTMNQAKQQQMTPKQALQRLKDGNQRFL
CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SNKPLARDYLKQAKQSAYGQYPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHH
ILGSMEFATKIAGARLVVVLAHTSCGAVAGACKDVKLGHLTDVINKIQPVVKPSMESTGI
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCC
DNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCHHCCCCCEEEEHHH
RSVPE
CCCCC
>Mature Secondary Structure 
PKKMLVAAFLCNIFCNPSHLYASSTEIPLLGKTMNQAKQQQMTPKQALQRLKDGNQRFL
CHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SNKPLARDYLKQAKQSAYGQYPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHH
ILGSMEFATKIAGARLVVVLAHTSCGAVAGACKDVKLGHLTDVINKIQPVVKPSMESTGI
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCC
DNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCHHCCCCCEEEEHHH
RSVPE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]