Click here to switch to the map view.

The map label for this gene is 54295258

Identifier: 54295258

GI number: 54295258

Start: 2669753

End: 2671468

Strand: Direct

Name: 54295258

Synonym: lpl2341

Alternate gene names: NA

Gene position: 2669753-2671468 (Clockwise)

Preceding gene: 54295257

Following gene: 54295260

Centisome position: 79.8

GC content: 40.73

Gene sequence:

>1716_bases
ATGAAAAAGACAGGTTATTTATTAATGTTTGTACTAGTTGCATGCTTTTGTAATCAGAAAATACTGGCAGCCATCCCCCT
GGTTGAGTTGATTGCAAAGCCCAACCCCACTCAATTTGTAAAAACCCAAAGCTCTGTCTTGTTATTTTATACTTTGCGCA
ATAATACAAGTGTTGGCTTTCCGCTTAGCTATTTATTTTCCAGCAATAACGCCAGCCTATCAAATGCTGGAAATACCTGT
GGAACATTTATTGGTCCAAACAAAACATGCCAATTTACTGTACAATATCAAGCTCCAGCTATTAGTATCACAGAAAAATT
AATAGTCCAGGTAGCTTATCAGGGACGGGCGCCAGTAAGCGATATTGTCTCTATCGATGTAGATAATAACATCGCCTGTA
CCTTACTCAATACGGCATCCTATCAAACTCCTTTCTGCCAACAGCAATACCAAAAAGTACTTCAATTTACTCCCGGCGTA
TTCAATACAACAAATCAAAATGTTCAAGAAGAACAAACTTTAGGAGGGATATTTGGCCTGTATCAGAATACAGGAAGCAC
TGAACAGATCTGTTACATAAGTTGTGGATTAAGGTCTTTAAATGGTACACCGCCCAATGAAAACACACTATTTGAATTAG
CCTCCGTCACCAAAACTTTTACCGGGTCAATATTAGGGAAATTTATTATCAATGGCACTATTGCTTCCCAATTTGATGAA
ATTCGGAATTATCCTCATCCTGCAGGTCTTAGCTTCAATGTCAATGAAGAAACTGTGAGTTTCCAGCAATTGGCTACTTT
CTCCGGAGGAGTTTGTTTCTCTGATGCTCCCAGTGTCAATCAAAGCAGTACAGATCAAGCTGTCAACCAAATGAATTTCA
TAACAGACATCAATGCGCTAAATCCTGATCCGAATAGCGGCAATTGTAGTAATGATGCACCCAATGTAAGACCTGTATAC
GCCACTCCGCCATTTTTACCAACACATAATTTCTACTCAAACAGTAGCGTGGGCTTACTAGGACAAAGTCTTATCCGTAT
CGATGGTTTTGCTAATGTCCTTGAACCCGATTTCAATAATTGGATGTGTAAGAACGTCACCAATCCTCTGGATATGATAA
GAACAAGCGCTTGTCTTCCTAATGAGGCTCACGATGGCACTTGTGGTACAGCAGCTGCAAACTGTGCTTACACTGCAAAT
TGGTTAACAGCTGAATACGCCTCAGGATATCATCTATTTCAAAACAGCTATCAGTTGGGCAACCCTTTCCCATTTTTACC
CTGGGCACCTGCTGGCGGAATTCGAAGTAACGCCTCTGATATGATTAAATTCATACGCGCTAATTTGGGCTTTAACACTG
GGGCTCATAACCCCGAACAAGCCCAGCTAATTCAGGGCATGTTGATGGCTCATGAACCAAATATTTACTTCCCAGGTGGC
ACAGAGCCTAATATAGGCAACCAAAGCCCTATACGTGGTGGCCAAGGCTATGCCTGGGTATGCATGCCTTCTCCCCCTAA
TGGAGACAGAATCTGTGGAAAAATTGGCGGACATAAAAATTTTCGCAGCTTTCTTGGCTTAAATAAAAGTAAAAACTATG
GTTTGATTATTTTATTTAATACGGGCGCTCTTACGACAGATGGAAGTTTGATTCCTGCGACAAAACCACCGGGTATAAGT
CAGATTGGCGCTAATTTATTAGAGAATGTTGATTAA

Upstream 100 bases:

>100_bases
CTACCCCTAACTCCCTTGGGCCTATAGAGCTTGTTTTAAACAATCAAAACATACTGGTAGGAATTAATTACTCGATATAA
CTCAATAACTCAGGCCAAAT

Downstream 100 bases:

>100_bases
TACATTCTGCTTCGATAGATAGGAAACAGGAATGCAACCGCTCATCACTCCTATACCTGGTATGTGTGAATGGCTACATA
AACCATGTAGCTCGACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MKKTGYLLMFVLVACFCNQKILAAIPLVELIAKPNPTQFVKTQSSVLLFYTLRNNTSVGFPLSYLFSSNNASLSNAGNTC
GTFIGPNKTCQFTVQYQAPAISITEKLIVQVAYQGRAPVSDIVSIDVDNNIACTLLNTASYQTPFCQQQYQKVLQFTPGV
FNTTNQNVQEEQTLGGIFGLYQNTGSTEQICYISCGLRSLNGTPPNENTLFELASVTKTFTGSILGKFIINGTIASQFDE
IRNYPHPAGLSFNVNEETVSFQQLATFSGGVCFSDAPSVNQSSTDQAVNQMNFITDINALNPDPNSGNCSNDAPNVRPVY
ATPPFLPTHNFYSNSSVGLLGQSLIRIDGFANVLEPDFNNWMCKNVTNPLDMIRTSACLPNEAHDGTCGTAAANCAYTAN
WLTAEYASGYHLFQNSYQLGNPFPFLPWAPAGGIRSNASDMIKFIRANLGFNTGAHNPEQAQLIQGMLMAHEPNIYFPGG
TEPNIGNQSPIRGGQGYAWVCMPSPPNGDRICGKIGGHKNFRSFLGLNKSKNYGLIILFNTGALTTDGSLIPATKPPGIS
QIGANLLENVD

Sequences:

>Translated_571_residues
MKKTGYLLMFVLVACFCNQKILAAIPLVELIAKPNPTQFVKTQSSVLLFYTLRNNTSVGFPLSYLFSSNNASLSNAGNTC
GTFIGPNKTCQFTVQYQAPAISITEKLIVQVAYQGRAPVSDIVSIDVDNNIACTLLNTASYQTPFCQQQYQKVLQFTPGV
FNTTNQNVQEEQTLGGIFGLYQNTGSTEQICYISCGLRSLNGTPPNENTLFELASVTKTFTGSILGKFIINGTIASQFDE
IRNYPHPAGLSFNVNEETVSFQQLATFSGGVCFSDAPSVNQSSTDQAVNQMNFITDINALNPDPNSGNCSNDAPNVRPVY
ATPPFLPTHNFYSNSSVGLLGQSLIRIDGFANVLEPDFNNWMCKNVTNPLDMIRTSACLPNEAHDGTCGTAAANCAYTAN
WLTAEYASGYHLFQNSYQLGNPFPFLPWAPAGGIRSNASDMIKFIRANLGFNTGAHNPEQAQLIQGMLMAHEPNIYFPGG
TEPNIGNQSPIRGGQGYAWVCMPSPPNGDRICGKIGGHKNFRSFLGLNKSKNYGLIILFNTGALTTDGSLIPATKPPGIS
QIGANLLENVD
>Mature_571_residues
MKKTGYLLMFVLVACFCNQKILAAIPLVELIAKPNPTQFVKTQSSVLLFYTLRNNTSVGFPLSYLFSSNNASLSNAGNTC
GTFIGPNKTCQFTVQYQAPAISITEKLIVQVAYQGRAPVSDIVSIDVDNNIACTLLNTASYQTPFCQQQYQKVLQFTPGV
FNTTNQNVQEEQTLGGIFGLYQNTGSTEQICYISCGLRSLNGTPPNENTLFELASVTKTFTGSILGKFIINGTIASQFDE
IRNYPHPAGLSFNVNEETVSFQQLATFSGGVCFSDAPSVNQSSTDQAVNQMNFITDINALNPDPNSGNCSNDAPNVRPVY
ATPPFLPTHNFYSNSSVGLLGQSLIRIDGFANVLEPDFNNWMCKNVTNPLDMIRTSACLPNEAHDGTCGTAAANCAYTAN
WLTAEYASGYHLFQNSYQLGNPFPFLPWAPAGGIRSNASDMIKFIRANLGFNTGAHNPEQAQLIQGMLMAHEPNIYFPGG
TEPNIGNQSPIRGGQGYAWVCMPSPPNGDRICGKIGGHKNFRSFLGLNKSKNYGLIILFNTGALTTDGSLIPATKPPGIS
QIGANLLENVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61748; Mature: 61748

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTGYLLMFVLVACFCNQKILAAIPLVELIAKPNPTQFVKTQSSVLLFYTLRNNTSVGF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCCC
PLSYLFSSNNASLSNAGNTCGTFIGPNKTCQFTVQYQAPAISITEKLIVQVAYQGRAPVS
CEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DIVSIDVDNNIACTLLNTASYQTPFCQQQYQKVLQFTPGVFNTTNQNVQEEQTLGGIFGL
CEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
YQNTGSTEQICYISCGLRSLNGTPPNENTLFELASVTKTFTGSILGKFIINGTIASQFDE
HCCCCCCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IRNYPHPAGLSFNVNEETVSFQQLATFSGGVCFSDAPSVNQSSTDQAVNQMNFITDINAL
HHCCCCCCCCEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHEECCCC
NPDPNSGNCSNDAPNVRPVYATPPFLPTHNFYSNSSVGLLGQSLIRIDGFANVLEPDFNN
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCC
WMCKNVTNPLDMIRTSACLPNEAHDGTCGTAAANCAYTANWLTAEYASGYHLFQNSYQLG
EEHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCEEHHHCCCEEEHHCCCCCC
NPFPFLPWAPAGGIRSNASDMIKFIRANLGFNTGAHNPEQAQLIQGMLMAHEPNIYFPGG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
TEPNIGNQSPIRGGQGYAWVCMPSPPNGDRICGKIGGHKNFRSFLGLNKSKNYGLIILFN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEC
TGALTTDGSLIPATKPPGISQIGANLLENVD
CCCCCCCCCEECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTGYLLMFVLVACFCNQKILAAIPLVELIAKPNPTQFVKTQSSVLLFYTLRNNTSVGF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCCC
PLSYLFSSNNASLSNAGNTCGTFIGPNKTCQFTVQYQAPAISITEKLIVQVAYQGRAPVS
CEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DIVSIDVDNNIACTLLNTASYQTPFCQQQYQKVLQFTPGVFNTTNQNVQEEQTLGGIFGL
CEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
YQNTGSTEQICYISCGLRSLNGTPPNENTLFELASVTKTFTGSILGKFIINGTIASQFDE
HCCCCCCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IRNYPHPAGLSFNVNEETVSFQQLATFSGGVCFSDAPSVNQSSTDQAVNQMNFITDINAL
HHCCCCCCCCEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHEECCCC
NPDPNSGNCSNDAPNVRPVYATPPFLPTHNFYSNSSVGLLGQSLIRIDGFANVLEPDFNN
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCC
WMCKNVTNPLDMIRTSACLPNEAHDGTCGTAAANCAYTANWLTAEYASGYHLFQNSYQLG
EEHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCEEHHHCCCEEEHHCCCCCC
NPFPFLPWAPAGGIRSNASDMIKFIRANLGFNTGAHNPEQAQLIQGMLMAHEPNIYFPGG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
TEPNIGNQSPIRGGQGYAWVCMPSPPNGDRICGKIGGHKNFRSFLGLNKSKNYGLIILFN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEC
TGALTTDGSLIPATKPPGISQIGANLLENVD
CCCCCCCCCEECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA