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The map label for this gene is 54295212

Identifier: 54295212

GI number: 54295212

Start: 2611818

End: 2613191

Strand: Direct

Name: 54295212

Synonym: lpl2294

Alternate gene names: NA

Gene position: 2611818-2613191 (Clockwise)

Preceding gene: 54295210

Following gene: 54295213

Centisome position: 78.07

GC content: 31.88

Gene sequence:

>1374_bases
ATGAAAAGAACTTTATTAAAACATTTAGAGAATTGGTTAATCTCATCAGATAGAAAACCTTTGGTCATTCGAGGAGCAAG
GCAAGTTGGAAAGACTTGGTTAGTTAGACATTTTGCTGAGAAATCTGGAAAGAAATTAATTGAACTTAACTTCGAGAAGA
ATCCTTCTTATGCAAGTCTTTTTAACCCGAATGACCCGGCGAAAATCTTACTAAATCTAAGTACTATATCAAATCAAAAG
ATTGATCCAGAAAAGTGTTTATTATTTCTAGATGAAATTCAAGCATCACCCCAACTATTTAGTAAACTGCGTTGGTTTGC
TGAAGATTTGCCTCAGTTATCTGTTATAGCTGCAGGCTCTCTATTAGAATTTGTACTAGCACAACATACTTTTAGCATGC
CTGTTGGACGAATTAGCTATATGCATTTAGAACCATTATCATTCGAAGAGTTTTTATTAGCTAATGATAAACAATCTCTT
TATGATTATTTGTATGTGTATGATTTAAAGACCGAAGTACCTGCTGCGATACACGAAAATTTAACAAGTTTATTTAAGGA
ATATATATTAGTTGGAGGTTTACCAGCTGTAGTTTCTAATTGGATTAAAGAACGCTCACTGAATCAAGTTAGCCAGATAC
AAAATGATTTACTAGCTACCTATAGAGATGATTTTTCTAAATATAGTGGTCGCATAGCCACAGAAAGGTTAGATGAAGTA
ATGTCATCAATCCCCAGAATGTTAGGTCAAAAATTTATATTTAGTAAAGTTAATAAAACAATACAATCAGGTACTATTAA
ACAAATTTTGGAGCTTTTAGAAAAAGCTCGTATTAGCCATCGCGTAAAAAGTTGTTCAGCTAATGGTGTGCCCTTAGCAG
CCGAAGTTAAAGAAAAATATTTTAAAGAAATATTTCTAGATGTTGGTTTATGTAGTACAGCATTGGGACTTAATTTAAAT
CAAATTAACTCAATAGATGAAATTATTATGATTAACAATGGAGGCATTGCCGAACAGATAGTGGGTCAACTTTTAAGGAC
AATTGATCCGCCATATATAGAACCCAATTTATATTGTTGGCACAGAGAAGAAGTTGGCTCCAGTGCTGAAATTGATTATG
TAATACAATATGGTAATAAAGTTATACCTATTGAAGTTAAAGCAGGTAGTACGGGAAGTCTAAAGTCGTTACATTTTTTC
ATGGGATTAAAAAAATACCCTTTTGCTCTACGTATTAATTCAGATTATCCAAATATAACTAATGTAGATGTGAAAGATAA
TTTGGGAAATCCGGTAAAGTATAATTTAATATCCATTCCTTTTTATCTTGTGAGACAGATACATAGACTTTTGACTTATG
TTGATTTAAATTAG

Upstream 100 bases:

>100_bases
CGTATTTTTTATTGAGATACTTATTAAAATTACCTGTTGTTTTATTGATTTAAAATAATTATTACTTATAATTCACTATG
ATAACTATAAAAATAAAATT

Downstream 100 bases:

>100_bases
AATTAGTCCACGTAGTTTTGCTGCATTTTATATTAATCGGTCTTTTAAGCACAATTTTGAAATTTCCTACATGTGCTTGG
TTTTCGACTAATGGAATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; NERD Domain Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASLFNPNDPAKILLNLSTISNQK
IDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGSLLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSL
YDYLYVYDLKTEVPAAIHENLTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEV
MSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKYFKEIFLDVGLCSTALGLNLN
QINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCWHREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFF
MGLKKYPFALRINSDYPNITNVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN

Sequences:

>Translated_457_residues
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASLFNPNDPAKILLNLSTISNQK
IDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGSLLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSL
YDYLYVYDLKTEVPAAIHENLTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEV
MSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKYFKEIFLDVGLCSTALGLNLN
QINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCWHREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFF
MGLKKYPFALRINSDYPNITNVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN
>Mature_457_residues
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASLFNPNDPAKILLNLSTISNQK
IDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGSLLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSL
YDYLYVYDLKTEVPAAIHENLTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEV
MSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKYFKEIFLDVGLCSTALGLNLN
QINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCWHREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFF
MGLKKYPFALRINSDYPNITNVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52021; Mature: 52021

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASL
CCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEC
FNPNDPAKILLNLSTISNQKIDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGS
CCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHH
LLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSLYDYLYVYDLKTEVPAAIHEN
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHH
LTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FKEIFLDVGLCSTALGLNLNQINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCW
HHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEE
HREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFFMGLKKYPFALRINSDYPNIT
EHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCHHCCCEEEEECCCCCCCC
NVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN
CCCCCCCCCCCCEEEHEECHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASL
CCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEC
FNPNDPAKILLNLSTISNQKIDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGS
CCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHH
LLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSLYDYLYVYDLKTEVPAAIHEN
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHH
LTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FKEIFLDVGLCSTALGLNLNQINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCW
HHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEE
HREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFFMGLKKYPFALRINSDYPNIT
EHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCHHCCCEEEEECCCCCCCC
NVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN
CCCCCCCCCCCCEEEHEECHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA